RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CLDN22Q8N7P3 220 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 LSMEM1Q8N8F7 131 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 ZSCAN1Q8NBB4 408 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 IFI44Q8TCB0 444 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 SLC2A12Q8TD20 617 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 ZNF721Q8TF20 911 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 BCL7BQ9BQE9 202 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 FUNDC2Q9BWH2 189 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 PRRG3Q9BZD7 231 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 OR8D2Q9GZM6 311 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 VN1R1Q9GZP7 353 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 NAA50Q9GZZ1 169 aaKnown RBP12.96□□□□□ -0.33
PTPN7-216ENST00000492977 GPN2Q9H9Y4 310 aaPredicted RBP12.96□□□□□ -0.33
PTPN7-216ENST00000492977 GPR83Q9NYM4 423 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 IL20Q9NYY1 176 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 MRTO4Q9UKD2 239 aaKnown RBP12.96□□□□□ -0.33
PTPN7-216ENST00000492977 RARRES3Q9UL19 164 aa12.96□□□□□ -0.33
PTPN7-216ENST00000492977 IGLV3-12A0A075B6K2 115 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 FRG2CA6NGY1 282 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 A8MUA0 341 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 PATE3B3GLJ2 98 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 ENTPD6O75354 484 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 ATE1O95260 518 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 STSP08842 583 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 C21orf33P30042 268 aaPredicted RBP12.95□□□□□ -0.34
PTPN7-216ENST00000492977 LCN1P31025 176 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF528Q3MIS6 628 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 ACSM5Q6NUN0 579 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 SLITRK4Q8IW52 837 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 CDK20Q8IZL9 346 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 IQCF1Q8N6M8 205 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 TCEANCQ8N8B7 351 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 POGLUT1Q8NBL1 392 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 C9orf43Q8TAL5 461 aaPredicted RBP12.95□□□□□ -0.34
PTPN7-216ENST00000492977 TMEM239Q8WW34 195 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 CLIP3Q96DZ5 547 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 CRELD1Q96HD1 420 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 LCORQ96JN0 433 aaPredicted RBP12.95□□□□□ -0.34
PTPN7-216ENST00000492977 CCDC74BQ96LY2 380 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 OR6C1Q96RD1 312 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 CDCA4Q9BXL8 241 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 TEX12Q9BXU0 123 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 PLA2G12AQ9BZM1 189 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 EGLN3Q9H6Z9 239 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 LIN28AQ9H9Z2 209 aaKnown RBP12.95□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF223Q9UK11 482 aaPredicted RBP12.95□□□□□ -0.34
PTPN7-216ENST00000492977 MKL2Q9ULH7 1088 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 TMEM5Q9Y2B1 443 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 SLC35A3Q9Y2D2 325 aa12.95□□□□□ -0.34
PTPN7-216ENST00000492977 RPL36Q9Y3U8 105 aaKnown RBP12.95□□□□□ -0.34
PTPN7-216ENST00000492977 A0A0B4J2E0 115 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 A0A1B0GX12 115 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 SERINC4A6NH21 518 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 CHP2O43745 196 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 NTN1O95631 604 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 IL33O95760 270 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 HBQ1P09105 142 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 CCNA2P20248 432 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 PSMB9P28065 219 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ADH7P40394 386 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 GPR4P46093 362 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 DAB2P98082 770 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 PRKCDQ05655 676 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 IRF3Q14653 427 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 NNATQ16517 81 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 SNAPC1Q16533 368 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 KLHL26Q53HC5 615 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 PLAG1Q6DJT9 500 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 WDR88Q6ZMY6 472 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 COX15Q7KZN9 410 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 BPHLQ86WA6 291 aaPredicted RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 MEX3DQ86XN8 651 aaKnown RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF440Q8IYI8 595 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF321PQ8N8H1 164 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ZNF527Q8NB42 609 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 OR2I1PQ8NGU4 316 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 OR4C3Q8NH37 302 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 WDR36Q8NI36 951 aaKnown RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ADIPOR1Q96A54 375 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 YIPF6Q96EC8 236 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 SLC38A2Q96QD8 506 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 DSN1Q9H410 356 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 UBQLN4Q9NRR5 601 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ENPP5Q9UJA9 477 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 UNC119BA6NIH7 251 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 OR6C76A6NM76 312 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 TLX2O43763 284 aaPredicted RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 PRKYO43930 277 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 PIP5K1CO60331 668 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ONECUT2O95948 504 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 CSTAP01040 98 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 RBM34P42696 430 aaKnown RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 RNF144AP50876 292 aaPredicted RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 EFNA3P52797 238 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 ROR2Q01974 943 aaKnown RBP12.94□□□□□ -0.34
PTPN7-216ENST00000492977 OCA2Q04671 838 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 NCF4Q15080 339 aa12.94□□□□□ -0.34
PTPN7-216ENST00000492977 NKAIN1Q4KMZ8 207 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms