RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 LAMTOR5O43504 91 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PRAF2O60831 178 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 OR2J3O76001 311 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TNFAIP8O95379 198 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 UTS2O95399 124 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CLDN7O95471 211 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SCGB1A1P11684 91 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 IFI30P13284 250 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 NQO1P15559 274 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 FBLN1P23142 703 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SLC6A1P30531 599 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CCKBRP32239 447 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CEACAM6P40199 344 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 RBM34P42696 430 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TNFRSF4P43489 277 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 AKR1D1P51857 326 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 FOXL2P58012 376 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 VSX2P58304 361 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PLP1P60201 277 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SORDQ00796 357 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ID3Q02535 119 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ZP4Q12836 540 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DNASE1L3Q13609 305 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CRMP1Q14194 572 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 KRT33BQ14525 404 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ELOA3BQ3SY89 546 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SOWAHCQ53LP3 525 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SLC35D3Q5M8T2 416 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 IDNKQ5T6J7 187 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ADAM5Q6NVV9 412 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 GJB7Q6PEY0 223 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DNM1P34Q6PK57 102 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 FAM180AQ6UWF9 173 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ACOT7LQ6ZUV0 252 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 MOB3CQ70IA8 216 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 KCTD1Q719H9 257 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ABHD13Q7L211 337 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 APTXQ7Z2E3 356 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF572Q7Z3I7 529 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 NRARPQ7Z6K4 114 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DHDDSQ86SQ9 333 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM135Q86UB9 458 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 RANBP3LQ86VV4 465 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 KCNMB4Q86W47 210 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PTOV1Q86YD1 416 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SPPL2CQ8IUH8 684 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TRAPPC5Q8IUR0 188 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 WDFY1Q8IWB7 410 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PRSS35Q8N3Z0 413 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CLDN22Q8N7P3 220 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 C8orf31Q8N9H6 132 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ELOA3Q8NG57 546 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 OR4K2Q8NGD2 314 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 OR52L2PQ8NGH6 319 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 GRPEL2Q8TAA5 225 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM163Q8TC26 289 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 LGALS14Q8TCE9 139 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 NPIPB3Q92617 1050 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DCPSQ96C86 337 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 C14orf144Q96I85 54 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SLC45A3Q96JT2 553 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 C12orf42Q96LP6 360 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 VSTM2LQ96N03 204 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF75AQ96N20 296 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TMEM209Q96SK2 561 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 FEVQ99581 238 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 TCEAL7Q9BRU2 100 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 H2AFJQ9BTM1 129 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 NPLQ9BXD5 320 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 C1QTNF5Q9BXJ0 243 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 LACRTQ9GZZ8 138 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 OR10A5Q9H207 317 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 KLHL31Q9H511 634 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CARS2Q9HA77 564 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 C6orf50Q9HD87 102 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ACSS1Q9NUB1 689 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 MRPS18AQ9NVS2 196 aaKnown RBP3.89□□□□□ -1.79
BRCA1-220ENST00000492859 C1orf109Q9NX04 203 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 IMPAD1Q9NX62 359 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ARL15Q9NXU5 204 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 SLC17A6Q9P2U8 582 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ZDHHC2Q9UIJ5 367 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 DKKL1Q9UK85 242 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 CTNND2Q9UQB3 1225 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 PDE10AQ9Y233 779 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ARL5AQ9Y689 179 aa3.89□□□□□ -1.79
BRCA1-220ENST00000492859 ARHGEF40Q8TER5 1519 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 NCOA1Q15788 1441 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 KIF1BO60333 1816 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 PCF11O94913 1555 aaKnown RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 BICRAQ9NZM4 1560 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 PNPLA7Q6ZV29 1317 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3DA0A087WVF3 549 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3IA0A087WXS9 549 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3EA0A087X179 549 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.88□□□□□ -1.79
BRCA1-220ENST00000492859 hCG_38984A0A1B0GV85 526 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3BA6NDS4 549 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 ZNF840PA6NDX5 716 aa3.88□□□□□ -1.79
BRCA1-220ENST00000492859 TBC1D3FA6NER0 549 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms