RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TSFMP43897 325 aaKnown RBP8.7□□□□□ -1.02
BRCA1-219ENST00000491747 ARFIP1P53367 373 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 SLC26A5P58743 744 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 ID2Q02363 134 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 SRSF11Q05519 484 aaKnown RBP8.7□□□□□ -1.02
BRCA1-219ENST00000491747 SF3B4Q15427 424 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■■■□□ 15.1
BRCA1-219ENST00000491747 FCRLBQ6BAA4 426 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 IGFL3Q6UXB1 125 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 LINC00696Q6ZRV3 163 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 OR4N5Q8IXE1 308 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF595Q8IYB9 648 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 METTL4Q8N3J2 472 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PARP16Q8N5Y8 322 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 TEX19Q8NA77 164 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 Q8NA96 180 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 MAGEB10Q96LZ2 347 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-219ENST00000491747 AGAP4Q96P64 663 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 RUBCNLQ9H714 662 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 SIAEQ9HAT2 523 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PCDHGB3Q9Y5G1 929 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 NPIPB8E9PQR5 432 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 M0R082 166 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 FGF17O60258 216 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SEMA3DO95025 777 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SNX4O95219 450 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CDK1P06493 297 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 KLK1P06870 262 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 C21orf33P30042 268 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SOX6P35712 828 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CSTF3Q12996 717 aaKnown RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 PLEKHN1Q494U1 663 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SPANXN2Q5MJ10 180 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SLX4IPQ5VYV7 408 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 DESI1Q6ICB0 168 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 JMJD6Q6NYC1 403 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF621Q6ZSS3 439 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 PRICKLE2Q7Z3G6 844 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SLC46A3Q7Z3Q1 461 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF605Q86T29 641 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 M1APQ8TC57 530 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 ADAMTS18Q8TE60 1221 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CHAC2Q8WUX2 184 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 TPD52L3Q96J77 140 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 LPAR4Q99677 370 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SPATA9Q9BWV2 254 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CDADC1Q9BWV3 514 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 BRF2Q9HAW0 419 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 PNO1Q9NRX1 252 aaKnown RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 ADPRHL2Q9NX46 363 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 TEX10Q9NXF1 929 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 PLA2G3Q9NZ20 509 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 LOC100506127A0A0U1RQW1 187 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 GLOD5A6NK44 160 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 E9PQ18 207 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CLDN4O14493 209 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SLC28A2O43868 658 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 F10P00742 488 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 KRT8P05787 483 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 GGT2P36268 569 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CASP3P42574 277 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 TNFRSF17Q02223 184 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CARTPTQ16568 116 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SLC6A19Q695T7 634 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 THOC7Q6I9Y2 204 aaKnown RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 H3F3CQ6NXT2 135 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CCBE1Q6UXH8 406 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 DGAT2L6Q6ZPD8 337 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 COMMD6Q7Z4G1 85 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 GALNT10Q86SR1 603 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 NUDT13Q86X67 352 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF675Q8TD23 568 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 ELP5Q8TE02 316 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 CAPSLQ8WWF8 208 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF486Q96H40 463 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 EGLN2Q96KS0 407 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 COL21A1Q96P44 957 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 TPK1Q9H3S4 243 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 MMP25Q9NPA2 562 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 FAM120CQ9NX05 1096 aaKnown RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 SIRT5Q9NXA8 310 aa8.69□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF223Q9UK11 482 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 MRPS33Q9Y291 106 aaKnown RBP8.69□□□□□ -1.02
BRCA1-219ENST00000491747 A0A1W2PS29 197 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 RGS13O14921 159 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 PGRMC2O15173 223 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 ADAMDEC1O15204 470 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 ALPPP05187 535 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 ICAM2P13598 275 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 GTF2E2P29084 291 aaKnown RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 RRM2P31350 389 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 CASRP41180 1078 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 GPR143P51810 404 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 RAE1P78406 368 aaKnown RBP8.68□□□□□ -1.02
BRCA1-219ENST00000491747 TEKQ02763 1124 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 MFAP5Q13361 173 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 EXT1Q16394 746 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 TIMM50Q3ZCQ8 353 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 CRB2Q5IJ48 1285 aa8.68□□□□□ -1.02
BRCA1-219ENST00000491747 C10orf62Q5T681 223 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms