RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 HOXA2O43364 376 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 PRSS3P35030 304 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 EIF1AXP47813 144 aaKnown RBP10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 DNASE1L1P49184 302 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 RAB13P51153 203 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 RAG2P55895 527 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 ODF4Q2M2E3 257 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 RPTNQ6XPR3 784 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 MEPCEQ7L2J0 689 aaKnown RBP10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 CXorf58Q96LI9 332 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 F2RL3Q96RI0 385 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 INPP5EQ9NRR6 644 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 MED17Q9NVC6 651 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 ZNF629Q9UEG4 869 aaPredicted RBP10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 TCRBV16S1A1N1A0A5B0 115 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 H0YIV9 168 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 K7ERQ8 282 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 NPC1O15118 1278 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 IFNA17P01571 189 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 IGHA2P01877 340 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 GLAP06280 429 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 GLULP15104 373 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 RAD52P43351 418 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 S100A10P60903 97 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 SSX2Q16385 188 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 Q6ZVL8 140 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 RBM45Q8IUH3 476 aaKnown RBP10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 CCDC116Q8IYX3 515 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 GHSRQ92847 366 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 NEIL2Q969S2 332 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 NPAS1Q99742 590 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 BTBD2Q9BX70 525 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 FGF20Q9NP95 211 aaPredicted RBP10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 ADAP2Q9NPF8 381 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 AGPAT2O15120 278 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 TO15178 435 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 GRM6O15303 877 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 AGR2O95994 175 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 RAB40ALP0C0E4 278 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 AKAIN1P0CW23 69 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 HTR1FP30939 366 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 KCNJ5P48544 419 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 PIP5KL1Q5T9C9 394 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 COX18Q8N8Q8 333 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 RAB40AQ8WXH6 277 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 SMPDL3BQ92485 455 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 SSX3Q99909 188 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 TAPBPLQ9BX59 468 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 PCBD2Q9H0N5 130 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 ATG5Q9H1Y0 275 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 OR2AG1Q9H205 316 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 DMRT3Q9NQL9 472 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 C1GALT1Q9NS00 363 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 CYB5R1Q9UHQ9 305 aa10.59□□□□□ -0.71
CRNKL1-204ENST00000490910 GGT3PA6NGU5 568 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 SOCS6O14544 535 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 HCCSP53701 268 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 GSG1Q2KHT4 349 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 MARCH8Q5T0T0 291 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 TCTN3Q6NUS6 607 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 CORO6Q6QEF8 472 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 CBARPQ8N350 705 aaPredicted RBP10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 RBP7Q96R05 134 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 PPP1R3EQ9H7J1 279 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 ADARB2Q9NS39 739 aaKnown RBP10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 UFSP2Q9NUQ7 469 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 TMEM184CQ9NVA4 438 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 DZANK1Q9NVP4 752 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 V9GY05 133 aa10.58□□□□□ -0.71
CRNKL1-204ENST00000490910 A0A0U1RQF3 1178 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 HEPACAM2A8MVW5 462 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 CDC40O60508 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 WISP3O95389 354 aaPredicted RBP10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 RAB3DO95716 219 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 IGLV3-25P01717 112 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 SPARCP09486 303 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 FURINP09958 794 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 UBE2IP63279 158 aaKnown RBP10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 C12orf73Q69YU5 71 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 TMEM107Q6UX40 140 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 BVESQ8NE79 360 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 FBXO22Q8NEZ5 403 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 LINC01599Q8WXQ3 324 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 SCMH1Q96GD3 660 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 SLC41A3Q96GZ6 507 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 CNN2Q99439 309 aaKnown RBP10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 DPH1Q9BZG8 443 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 GAREM1Q9H706 876 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 MKKSQ9NPJ1 570 aaPredicted RBP10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 CHST2Q9Y4C5 530 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 ERI3O43414 337 aaKnown RBP10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 GJB5O95377 273 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 SLC6A11P48066 632 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 FXYD6P3P58550 94 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 HLXQ14774 488 aaPredicted RBP10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 NXPE4Q6UWF7 544 aa10.58□□□□□ -0.72
CRNKL1-204ENST00000490910 ESPNLQ6ZVH7 1005 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms