RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SPANXN4Q5MJ08 99 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 NXNQ6DKJ4 435 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 TMCO5AQ8N6Q1 288 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 TRIML2Q8N7C3 387 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 FNDC9Q8TBE3 224 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 GPATCH1Q9BRR8 931 aaKnown RBP15.71■□□□□ 0.11
SEC13-218ENST00000490283 CLEC4MQ9H2X3 399 aaPredicted RBP15.71■□□□□ 0.11
SEC13-218ENST00000490283 MANSC1Q9H8J5 431 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 MCTS1Q9ULC4 181 aaKnown RBP15.71■□□□□ 0.11
SEC13-218ENST00000490283 DTNAQ9Y4J8 743 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 KCNE3Q9Y6H6 103 aa15.71■□□□□ 0.11
SEC13-218ENST00000490283 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 A6NNC1 897 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 SDHDO14521 159 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 SNNO75324 88 aaPredicted RBP15.7■□□□□ 0.1
SEC13-218ENST00000490283 TNFSF13O75888 250 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 GOSR1O95249 250 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 PLGP00747 810 aaPredicted RBP15.7■□□□□ 0.1
SEC13-218ENST00000490283 EPXP11678 715 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 NME5P56597 212 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 SIRPAP78324 504 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 LRRC74AQ0VAA2 488 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 CHDHQ8NE62 594 aaPredicted RBP15.7■□□□□ 0.1
SEC13-218ENST00000490283 TOR1AIP2Q8NFQ8 470 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 ARL8AQ96BM9 186 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 TLCD1Q96CP7 247 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 ZNF845Q96IR2 970 aaPredicted RBP15.7■□□□□ 0.1
SEC13-218ENST00000490283 SDF2Q99470 211 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 NMUR2Q9GZQ4 415 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 OR51I1Q9H343 314 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 RNF122Q9H9V4 155 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 RASSF1Q9NS23 344 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 AIG1Q9NVV5 245 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 NDRG3Q9UGV2 375 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 CARD8Q9Y2G2 431 aa15.7■□□□□ 0.1
SEC13-218ENST00000490283 GPC6Q9Y625 555 aaPredicted RBP15.7■□□□□ 0.1
SEC13-218ENST00000490283 KIAA1549Q9HCM3 1950 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 GOLGA8QA0A0J9YX86 632 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 GOLGA8OA6NCC3 632 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 GJE1A6NN92 205 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 A8MXE2 369 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 GOLGA8NF8WBI6 632 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 CASKO14936 926 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 ANKRD28O15084 1053 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 EIF4E2O60573 245 aaKnown RBP15.69■□□□□ 0.1
SEC13-218ENST00000490283 UBL4AP11441 157 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 ELK4P28324 431 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 EPHA3P29320 983 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 KHKP50053 298 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 ANXA11P50995 505 aaKnown RBP15.69■□□□□ 0.1
SEC13-218ENST00000490283 CCR4P51679 360 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 HPCAP84074 193 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 CASP8Q14790 479 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 DAZAP2Q15038 168 aaPredicted RBP15.69■□□□□ 0.1
SEC13-218ENST00000490283 GPR68Q15743 365 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 ARHGAP11BQ3KRB8 267 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 HBMQ6B0K9 141 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 ESPNLQ6ZVH7 1005 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 GGNQ86UU5 652 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 CLEC4FQ8N1N0 589 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 OR10D3Q8NH80 312 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 OR2V1Q8NHB1 315 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 LINC01560Q8TB33 94 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 MIPOL1Q8TD10 442 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 REXO5Q96IC2 774 aaKnown RBP15.69■□□□□ 0.1
SEC13-218ENST00000490283 DOCK7Q96N67 2140 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 SLC39A3Q9BRY0 314 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 TMEM185BQ9H7F4 350 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 TIGARQ9NQ88 270 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 BTNL2Q9UIR0 455 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 EMC9Q9Y3B6 208 aa15.69■□□□□ 0.1
SEC13-218ENST00000490283 ANKHD1Q8IWZ3 2542 aaKnown RBP15.69■□□□□ 0.1
SEC13-218ENST00000490283 ZNF264O43296 627 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 ALDOCP09972 364 aaKnown RBP15.68■□□□□ 0.1
SEC13-218ENST00000490283 LINGO3P0C6S8 592 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 IDO1P14902 403 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 ADH6P28332 368 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 KCNJ5P48544 419 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 RNF144AP50876 292 aaPredicted RBP15.68■□□□□ 0.1
SEC13-218ENST00000490283 CTBP2P56545 445 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 UFM1P61960 85 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 FOXF1Q12946 379 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 CBFBQ13951 182 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.68■□□□□ 0.1
SEC13-218ENST00000490283 PDZK1Q5T2W1 519 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 AGBL2Q5U5Z8 902 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 TNFAIP8L2Q6P589 184 aaPredicted RBP15.68■□□□□ 0.1
SEC13-218ENST00000490283 VWA1Q6PCB0 445 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 LILRA2Q8N149 483 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 GLB1L3Q8NCI6 653 aaPredicted RBP15.68■□□□□ 0.1
SEC13-218ENST00000490283 RFWD2Q8NHY2 731 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 XAGE5Q8WWM1 108 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 STARD4Q96DR4 205 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 KLHL15Q96M94 604 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 CCDC115Q96NT0 180 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 DACH2Q96NX9 599 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 PANX1Q96RD7 426 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 SLC35A5Q9BS91 424 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 SERHL2Q9H4I8 314 aa15.68■□□□□ 0.1
SEC13-218ENST00000490283 WDR55Q9H6Y2 383 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms