RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	FAM234B	A2RU67	622 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	C7orf72	A4D263	438 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	SERINC4	A6NH21	518 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	SHISA8	B8ZZ34	492 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	SEC14L5	O43304	696 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	RCBTB2	O95199	551 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	ANP32D	O95626	131 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	NUDT14	O95848	222 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	EIF1	P41567	113 aa	Known RBP	10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	MAGEA8	P43361	318 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	MRPL19	P49406	292 aa	Known RBP	10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	RNF144A	P50876	292 aa	Predicted RBP	10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	ZNF136	P52737	540 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	SUMO3	P55854	103 aa	Predicted RBP	10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	IRX1	P78414	480 aa	Predicted RBP	10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	ZNF117	Q03924	483 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	ZNF141	Q15928	474 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	PLPPR5	Q32ZL2	321 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	TIGD2	Q4W5G0	525 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	GPAT3	Q53EU6	434 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	PDZK1	Q5T2W1	519 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	MEX3B	Q6ZN04	569 aa	Known RBP	10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	P4HA3	Q7Z4N8	544 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	OR9I1	Q8NGQ6	314 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	OIT3	Q8WWZ8	545 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	SMPDL3B	Q92485	455 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	VPS33A	Q96AX1	596 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	ROPN1L	Q96C74	230 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	ITCH	Q96J02	903 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	ENKD1	Q9H0I2	346 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	ZNF446	Q9NWS9	450 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	CLCF1	Q9UBD9	225 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	MKLN1	Q9UL63	735 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	LIPT1	Q9Y234	373 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	WDR45	Q9Y484	360 aa		10.01	□□□□□ -0.81
GGA1-222	ENST00000489772	NCOA6	Q14686	2063 aa	Predicted RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	SLC22A20	A6NK97	555 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	HMGN4	O00479	90 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	ZNF264	O43296	627 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	KIAA0513	O60268	411 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	EIF4E2	O60573	245 aa	Known RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	TNFRSF21	O75509	655 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	UGT2B17	O75795	530 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	IL18BP	O95998	194 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	ZCCHC18	P0CG32	403 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	TMIGD3	P0DMS9	266 aa	Predicted RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	UBL4A	P11441	157 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	IGFBP2	P18065	325 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	ME2	P23368	584 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	P2RX1	P51575	399 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	SUCLG1	P53597	346 aa	Known RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	CLDN20	P56880	219 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	RPS3A	P61247	264 aa	Known RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	EEF1A1	P68104	462 aa	Known RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	CBFB	Q13951	182 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	HSP90B2P	Q58FF3	399 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	C6orf10	Q5SRN2	563 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	EEF1A1P5	Q5VTE0	462 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	OR2A2	Q6IF42	318 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	TYW3	Q6IPR3	259 aa	Known RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	CBLN3	Q6UW01	205 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	EIF3M	Q7L2H7	374 aa	Known RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	GDF7	Q7Z4P5	450 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	TMCO5A	Q8N6Q1	288 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	ACBD4	Q8NC06	268 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	TOR1AIP2	Q8NFQ8	470 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	PNPT1	Q8TCS8	783 aa	Known RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	RNF145	Q96MT1	663 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	TRNT1	Q96Q11	434 aa	Known RBP	10	□□□□□ -0.81
GGA1-222	ENST00000489772	SIKE1	Q9BRV8	207 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	SFXN3	Q9BWM7	321 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	SLC24A3	Q9HC58	644 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	ICAM5	Q9UMF0	924 aa		10	□□□□□ -0.81
GGA1-222	ENST00000489772	CSMD1	Q96PZ7	3565 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772		H0YC42	278 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	SYT5	O00445	386 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	EIF1AY	O14602	144 aa	Known RBP	9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	CYP7B1	O75881	506 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	H6PD	O95479	791 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	TGM6	O95932	706 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	CSTA	P01040	98 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	LINGO3	P0C6S8	592 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	PRF1	P14222	555 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	ADH6	P28332	368 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	PEX19	P40855	299 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	EIF1AX	P47813	144 aa	Known RBP	9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	ASCL1	P50553	236 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	CCR4	P51679	360 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	AGFG1	P52594	562 aa	Known RBP	9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	TPD52	P55327	224 aa	Predicted RBP	9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	CLDN15	P56746	228 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	RAC1	P63000	192 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	SGCB	Q16585	318 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	AP1AR	Q63HQ0	302 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	OLIG3	Q7RTU3	272 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	ZNF619	Q8N2I2	560 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	ARFGAP2	Q8N6H7	521 aa		9.99	□□□□□ -0.81
GGA1-222	ENST00000489772	METTL25	Q8N6Q8	603 aa		9.99	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms