RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 HHATLQ9HCP6 504 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 PFDN4Q9NQP4 134 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 FAM120CQ9NX05 1096 aaKnown RBP10.01□□□□□ -0.81
HDAC6-233ENST00000489352 IFNKQ9P0W0 207 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 AMDHD2Q9Y303 409 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF780BQ9Y6R6 833 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 IGHV3-15A0A0B4J1V0 119 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 MIF4GDA9UHW6 222 aaKnown RBP10□□□□□ -0.81
HDAC6-233ENST00000489352 hCG_2039718K7EN88 272 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 TAPBPO15533 448 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 RGS14O43566 566 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 GUCY1B2O75343 617 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 WNT11O96014 354 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 CRYAAP02489 173 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 S100BP04271 92 aaPredicted RBP10□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF37AP17032 561 aaPredicted RBP10□□□□□ -0.81
HDAC6-233ENST00000489352 GABRB3P28472 473 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 GGT5P36269 586 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 RFX3P48380 749 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 MANFP55145 182 aaKnown RBP10□□□□□ -0.81
HDAC6-233ENST00000489352 GPX6P59796 221 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 EFNB3Q15768 340 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 ADIPOQQ15848 244 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 DECR1Q16698 335 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 SEL1L2Q5TEA6 688 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 RUSC1-AS1Q66K80 236 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 ASPHD2Q6ICH7 369 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 SULT1C3Q6IMI6 304 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 KLHL24Q6TFL4 600 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 RHOUQ7L0Q8 258 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 TRABD2AQ86V40 505 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 OR4N2Q8NGD1 307 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 KLHL29Q96CT2 875 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 TMEM79Q9BSE2 394 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 RTN4RQ9BZR6 473 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 CXorf36Q9H7Y0 433 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 PPANQ9NQ55 473 aaKnown RBP10□□□□□ -0.81
HDAC6-233ENST00000489352 CD274Q9NZQ7 290 aa10□□□□□ -0.81
HDAC6-233ENST00000489352 PACSIN2Q9UNF0 486 aaPredicted RBP10□□□□□ -0.81
HDAC6-233ENST00000489352 PPIHO43447 177 aaKnown RBP9.99□□□□□ -0.81
HDAC6-233ENST00000489352 ENPP1P22413 925 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 PSMD4P55036 377 aaKnown RBP9.99□□□□□ -0.81
HDAC6-233ENST00000489352 HLXQ14774 488 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-233ENST00000489352 LTB4RQ15722 352 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 GABRA6Q16445 453 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 OLFML2AQ68BL7 652 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 C16orf87Q6PH81 154 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 DVL3Q92997 716 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-233ENST00000489352 MUS81Q96NY9 551 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 PSD2Q9BQI7 771 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 XAB2Q9HCS7 855 aaKnown RBP9.99□□□□□ -0.81
HDAC6-233ENST00000489352 TAS2R9Q9NYW1 312 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 FLRT3Q9NZU0 649 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 SENP1Q9P0U3 644 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 PCDHGA11Q9Y5H2 935 aa9.99□□□□□ -0.81
HDAC6-233ENST00000489352 PLXNB1O43157 2135 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 C1orf226A1L170 272 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 C7orf72A4D263 438 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 PLPP2O43688 288 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 NME6O75414 186 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-233ENST00000489352 TSPAN15O95858 294 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 ADRA2AP08913 450 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 MLNP12872 115 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 GATA3P23771 443 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 SLC7A1P30825 629 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 PRPS1P60891 318 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 CUL3Q13618 768 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 TMEM176BQ3YBM2 270 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-233ENST00000489352 CYP27C1Q4G0S4 372 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 ARMCX4Q5H9R4 360 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 CCNYL2Q5T2Q4 361 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 SLC48A1Q6P1K1 146 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 GALNT18Q6P9A2 607 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 NPSR1Q6W5P4 371 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 SPATA21Q7Z572 469 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 ATP6V1C2Q8NEY4 427 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 APH1AQ96BI3 265 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 VSTM2LQ96N03 204 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF300Q96RE9 604 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF717Q9BY31 904 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-233ENST00000489352 TPK1Q9H3S4 243 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 ANKRA2Q9H9E1 313 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 EMC3Q9P0I2 261 aa9.98□□□□□ -0.81
HDAC6-233ENST00000489352 IGLV3-32A0A0A0MS00 114 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 A0A1W2PRB8 838 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF724A8MTY0 619 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 CLDN34H7C241 214 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 SLITRK5O94991 958 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 KLK1P06870 262 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 EDNRAP25101 427 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 EIF1P41567 113 aaKnown RBP9.97□□□□□ -0.81
HDAC6-233ENST00000489352 ALDH9A1P49189 494 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 TMEM33P57088 247 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 LMO4P61968 165 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 TGFBR3Q03167 851 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF155Q12901 538 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-233ENST00000489352 SLC9A3R2Q15599 337 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 PLPPR5Q32ZL2 321 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 CDKL4Q5MAI5 379 aa9.97□□□□□ -0.81
HDAC6-233ENST00000489352 C9orf135Q5VTT2 229 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms