RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 IST1P53990 364 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 RPS3AP61247 264 aaKnown RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 MAGOHP61326 146 aaKnown RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 SORDQ00796 357 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 FAM27E3Q08E93 113 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 TESK1Q15569 626 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 TOMM34Q15785 309 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 SMU1Q2TAY7 513 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 CTU2Q2VPK5 515 aaKnown RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 KLHL26Q53HC5 615 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 PDZK1Q5T2W1 519 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 OR2A2Q6IF42 318 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 C6orf120Q7Z4R8 191 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 HMGN2P46Q86SG4 172 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 LSRQ86X29 649 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 CDC20BQ86Y33 519 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 GTPBP8Q8N3Z3 284 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 NATD1Q8N6N6 113 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 TMCO5AQ8N6Q1 288 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 OR10D3Q8NH80 312 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 MOAP1Q96BY2 351 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 ZNF524Q96C55 264 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 TEX37Q96LM6 180 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 SDF2Q99470 211 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 OR51I1Q9H343 314 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 WDR55Q9H6Y2 383 aaPredicted RBP12.59□□□□□ -0.39
VTI1A-206ENST00000489142 RNF122Q9H9V4 155 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 MEAF6Q9HAF1 191 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 HAO1Q9UJM8 370 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 PLEKHA6Q9Y2H5 1048 aa12.59□□□□□ -0.39
VTI1A-206ENST00000489142 FAM221AA4D161 298 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 SH3D21A4FU49 640 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 RNASET2O00584 256 aaKnown RBP12.58□□□□□ -0.4
VTI1A-206ENST00000489142 CXCL13O43927 109 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 SCN2BO60939 215 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 TUBBP07437 444 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 LINGO3P0C6S8 592 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 LCN1P31025 176 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 CCR4P51679 360 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 UFM1P61960 85 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 GPR68Q15743 365 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 FAM174BQ3ZCQ3 159 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 TNFAIP8L2Q6P589 184 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF474Q6S9Z5 364 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-206ENST00000489142 CROCCP2Q86T23 111 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 MISPQ8IVT2 679 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF527Q8NB42 609 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 ATP6V1C2Q8NEY4 427 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 OR8J2Q8NGG1 315 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 ACTRT2Q8TDY3 377 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 RAB8BQ92930 207 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 ZBTB8AQ96BR9 441 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 ADGRG7Q96K78 797 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 MARK4Q96L34 752 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 PRRG4Q9BZD6 226 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 CCM2LQ9NUG4 571 aaPredicted RBP12.58□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF175Q9Y473 711 aa12.58□□□□□ -0.4
VTI1A-206ENST00000489142 MED13LQ71F56 2210 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 A0A0J9YW62 118 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 NPIPB9F8W1W9 429 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 GTPBP1O00178 669 aaKnown RBP12.57□□□□□ -0.4
VTI1A-206ENST00000489142 MSTNO14793 375 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 EFNA2O43921 213 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 FCMRO60667 390 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 OR12D1P0DN82 309 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 EPHA3P29320 983 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 IL12AP29459 219 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 S100A3P33764 101 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 KCNJ5P48544 419 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 ATP12AP54707 1039 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 DAZAP2Q15038 168 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-206ENST00000489142 EXOC3L2Q2M3D2 409 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 BEND6Q5SZJ8 279 aaPredicted RBP12.57□□□□□ -0.4
VTI1A-206ENST00000489142 HBMQ6B0K9 141 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 BHLHB9Q6PI77 547 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 C16orf62Q7Z3J2 963 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 LILRA2Q8N149 483 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF610Q8N9Z0 462 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 OR2V1Q8NHB1 315 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 FBXO27Q8NI29 283 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 HOXD1Q9GZZ0 328 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 TMBIM4Q9HC24 238 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 KLHL28Q9NXS3 571 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 ST6GALNAC2Q9UJ37 374 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 KCNE5Q9UJ90 142 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 MKLN1Q9UL63 735 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 ICAM5Q9UMF0 924 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 DTNAQ9Y4J8 743 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 ABCA4P78363 2273 aa12.57□□□□□ -0.4
VTI1A-206ENST00000489142 PRSS51A0A1B0GVH4 220 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 C7orf72A4D263 438 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 E9PBE3 544 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 H3BNH8 94 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 SNNO75324 88 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-206ENST00000489142 ERLIN1O75477 346 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 CYP7B1O75881 506 aa12.56□□□□□ -0.4
VTI1A-206ENST00000489142 SNUPNO95149 360 aaKnown RBP12.56□□□□□ -0.4
VTI1A-206ENST00000489142 PLGP00747 810 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms