RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 HMGA2P52926 109 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 UGT2B15P54855 530 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 FBXW4P57775 412 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 COPZ1P61923 177 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 SKP2Q13309 424 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 MED21Q13503 144 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 ATP1A4Q13733 1029 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 CD226Q15762 336 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 NDUFAF6Q330K2 333 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 FAHD1Q6P587 224 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 ZNF613Q6PF04 617 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 ZNF730Q6ZMV8 503 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 RRM2BQ7LG56 351 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 GALNT5Q7Z7M9 940 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 DHRSXQ8N5I4 330 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 AMER2Q8N7J2 671 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 POGLUT1Q8NBL1 392 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 AQP11Q8NBQ7 271 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 ZNF555Q8NEP9 628 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 ADAMTS16Q8TE57 1224 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 GRHL3Q8TE85 626 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 NXPE2Q96DL1 559 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 NAF1Q96HR8 494 aaKnown RBP9.2□□□□□ -0.94
USP11-211ENST00000489111 RASL10BQ96S79 203 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 FEVQ99581 238 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 PRR14Q9BWN1 585 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 TOR3AQ9H497 397 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 RIBC2Q9H4K1 309 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 KRCC1Q9NPI7 259 aaPredicted RBP9.2□□□□□ -0.94
USP11-211ENST00000489111 EXOSC3Q9NQT5 275 aaKnown RBP9.2□□□□□ -0.94
USP11-211ENST00000489111 PAPOLBQ9NRJ5 636 aaKnown RBP9.2□□□□□ -0.94
USP11-211ENST00000489111 ENOPH1Q9UHY7 261 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 SLC7A7Q9UM01 511 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 NTNG1Q9Y2I2 539 aa9.2□□□□□ -0.94
USP11-211ENST00000489111 MRPS18BQ9Y676 258 aaKnown RBP9.2□□□□□ -0.94
USP11-211ENST00000489111 GVINP1Q7Z2Y8 2422 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 SH3PXD2BA1X283 911 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 TMEM200CA6NKL6 621 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 TP53I11O14683 189 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 ZNF264O43296 627 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 HCRTR2O43614 444 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 ITGA10O75578 1167 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 ADAP00813 363 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 SERPINA7P05543 415 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 FBXO45P0C2W1 286 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 LINGO3P0C6S8 592 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 ITGAMP11215 1152 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 HTR2AP28223 471 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 RYKP34925 604 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 CAPGP40121 348 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 SLC6A8P48029 635 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 DAPP51397 102 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 SSR4P51571 173 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 TPD52P55327 224 aaPredicted RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 RPP38P78345 283 aaKnown RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 PLAURQ03405 335 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 MERTKQ12866 999 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 OR1Q1Q15612 314 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 ZIK1Q3SY52 487 aaPredicted RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 NHSL2Q5HYW2 709 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 FNDC7Q5VTL7 733 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 KDM4DQ6B0I6 523 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 KRT80Q6KB66 452 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 PODNL1Q6PEZ8 512 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 OPN5Q6U736 354 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 NUP54Q7Z3B4 507 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 GDF7Q7Z4P5 450 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 MARCH3Q86UD3 253 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 TSPYL5Q86VY4 417 aaPredicted RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 RPS19BP1Q86WX3 136 aaKnown RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 DTX1Q86Y01 620 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 MISPQ8IVT2 679 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 DND1Q8IYX4 353 aaKnown RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 CADM2Q8N3J6 435 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 FAM71CQ8NEG0 241 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 OR4K5Q8NGD3 323 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 OR9Q2Q8NGE9 314 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 PIGXQ8TBF5 258 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 SLC7A13Q8TCU3 470 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 ASB15Q8WXK1 588 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 TTC9Q92623 222 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 SPACA9Q96E40 222 aaPredicted RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 SH3YL1Q96HL8 342 aaPredicted RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 CNBD2Q96M20 576 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 ZNF570Q96NI8 536 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 PSD2Q9BQI7 771 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 METTL7AQ9H8H3 244 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 HHATLQ9HCP6 504 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 MAN2C1Q9NTJ4 1040 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 RYDENQ9NUL5 291 aaKnown RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 KLRF1Q9NZS2 232 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 IL17BQ9UHF5 180 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 TMEFF2Q9UIK5 374 aaPredicted RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 MGAT4BQ9UQ53 548 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 CARD8Q9Y2G2 431 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 POFUT2Q9Y2G5 429 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 YARS2Q9Y2Z4 477 aaKnown RBP9.19□□□□□ -0.94
USP11-211ENST00000489111 ZNF292O60281 2723 aa9.19□□□□□ -0.94
USP11-211ENST00000489111 A0A1B0GWA3 101 aa9.18□□□□□ -0.94
USP11-211ENST00000489111 DCDC2BA2VCK2 349 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms