RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 LANCL3Q6ZV70 420 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 P4HA3Q7Z4N8 544 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 NPAS3Q8IXF0 933 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 MIER2Q8N344 545 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 CPXM2Q8N436 756 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ADPRHL1Q8NDY3 354 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 OR2L3Q8NG85 312 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ACOT11Q8WXI4 607 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 RSRP1Q9BUV0 290 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 REPIN1Q9BWE0 567 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 SPATC1LQ9H0A9 340 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 TXNL4BQ9NX01 149 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 CNOT2Q9NZN8 540 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 RFXAPO00287 272 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ZNF593O00488 134 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 ABLIM3O94929 683 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 THP07101 528 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 C1GALT1C1LP0DN25 315 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 HKR1P10072 659 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 AHCYP23526 432 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 DHPSP49366 369 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 MECP2P51608 486 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 CCR4P51679 360 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 SRSF3P84103 164 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 ST3GAL4Q11206 333 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ZRANB3Q5FWF4 1079 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ZNF385CQ66K41 422 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 FBXO16Q8IX29 292 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 TP53INP2Q8IXH6 220 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 NUBPLQ8TB37 319 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 HPSE2Q8WWQ2 592 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 WDR89Q96FK6 387 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 WDR26Q9H7D7 661 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 IL26Q9NPH9 171 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 CA10Q9NS85 328 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ACSS1Q9NUB1 689 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 NFKBIL1Q9UBC1 381 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 UBQLN1Q9UMX0 589 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 LOC105369274A0A096LPK9 316 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 IGKV6-21A0A0C4DH24 114 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 OR6C76A6NM76 312 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 KCNAB3O43448 404 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 MAFKO60675 156 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 GLCEO94923 617 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 F13BP05160 661 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 THEGLP0DJG4 465 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 CDKN2CP42773 168 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 LIMS1P48059 325 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 PPIAP62937 165 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 PPP1R8Q12972 351 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 SF1Q15637 639 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 ETFRF1Q6IPR1 90 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 TRIM69Q86WT6 500 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 OR4N4Q8N0Y3 316 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ZNF664Q8N3J9 261 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 UBAC2Q8NBM4 344 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 FAM71CQ8NEG0 241 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 GNPDA2Q8TDQ7 276 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 MYLIPQ8WY64 445 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 S100PBPQ96BU1 408 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 HMCESQ96FZ2 354 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 MRGPRX3Q96LB0 322 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 IFT27Q9BW83 186 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ADAM19Q9H013 955 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 GSTO2Q9H4Y5 243 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 NT5MQ9NPB1 228 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 SMCO4Q9NRQ5 59 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 SF3B6Q9Y3B4 125 aaKnown RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 A0A087X1B8 175 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ABHD14A-ACY1A0A1B0GW23 586 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 MOSPD3O75425 235 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 BCHEP06276 602 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ALPIP09923 528 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 RPA2P15927 270 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 NT5EP21589 574 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 LMO2P25791 158 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 PSMB6P28072 239 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 SCNN1AP37088 669 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 TAF6P49848 677 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 GZMMP51124 257 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ACLYP53396 1101 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 PITX1P78337 314 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 BLOC1S1P78537 153 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ATAT1Q5SQI0 421 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 NSUN5P2Q63ZY6 315 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 CLEC6AQ6EIG7 209 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 Q6ZTK2 550 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 LRRC52Q8N7C0 313 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 HSD17B11Q8NBQ5 300 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 RELL2Q8NC24 303 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 OR2V1Q8NHB1 315 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 SOCS4Q8WXH5 440 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 ACOT12Q8WYK0 555 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 KCTD13Q8WZ19 329 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 CENPIQ92674 756 aaPredicted RBP5.94□□□□□ -1.46
SIK3-212ENST00000488337 HAS2Q92819 552 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 MR1Q95460 341 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 PNPLA2Q96AD5 504 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 LINGO1Q96FE5 620 aa5.94□□□□□ -1.46
SIK3-212ENST00000488337 CDKN2AIPNLQ96HQ2 116 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms