RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 OR7G2Q8NG99 324 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 C8orf46Q8TAG6 207 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 M1APQ8TC57 530 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PNPT1Q8TCS8 783 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 SPPL2AQ8TCT8 520 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 AGAP11Q8TF27 550 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 TMEM37Q8WXS4 190 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 STARD8Q92502 1023 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 FAM3CQ92520 227 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PIK3R3Q92569 461 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 ANP32BQ92688 251 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 B3GALT6Q96L58 329 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 ATP6V1G3Q96LB4 118 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 TGM7Q96PF1 710 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PAIP2Q9BPZ3 127 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 SIKE1Q9BRV8 207 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 TMEM175Q9BSA9 504 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 FEM1AQ9BSK4 669 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 UBAC1Q9BSL1 405 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 YTHDF1Q9BYJ9 559 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 FAM192AQ9GZU8 254 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 OR52A5Q9H2C5 316 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 C8orf33Q9H7E9 229 aaPredicted RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 TMEM185BQ9H7F4 350 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SUDS3Q9H7L9 328 aaPredicted RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 GEMIN7Q9H840 131 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 MCCC2Q9HCC0 563 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 POLD4Q9HCU8 107 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 IL20Q9NYY1 176 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 NDUFA13Q9P0J0 144 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 MBD2Q9UBB5 411 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 DBF4Q9UBU7 674 aaPredicted RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 MIOXQ9UGB7 285 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PILRAQ9UKJ1 303 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PRDM4Q9UKN5 801 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 IKZF3Q9UKT9 509 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 ZNF346Q9UL40 294 aaKnown RBP1.54□□□□□ -2.16
USP9X-208ENST00000487625 CDH9Q9ULB4 789 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 NPIPA1Q9UND3 350 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 RPH3ALQ9UNE2 315 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PIGLQ9Y2B2 252 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SLC9A8Q9Y2E8 581 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 STK38LQ9Y2H1 464 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 KLHDC2Q9Y2U9 406 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 TMED7Q9Y3B3 224 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 WDR45Q9Y484 360 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 ATG4BQ9Y4P1 393 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 PPIAL4AQ9Y536 164 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 NPTNQ9Y639 398 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 SELENOKQ9Y6D0 94 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 NEURL4Q96JN8 1562 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 ARID2Q68CP9 1835 aa1.54□□□□□ -2.16
USP9X-208ENST00000487625 GSTTP1A0A1W2PQM5 241 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 TTC26A0AVF1 554 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 SH3PXD2BA1X283 911 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 BTBD17A6NE02 478 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 NKX6-3A6NJ46 265 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 YJEFN3A6XGL0 299 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 WASHC1A8K0Z3 465 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 FAM220BPB1ANY3 271 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 FOXE1O00358 373 aaPredicted RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 TRAFD1O14545 582 aaPredicted RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 HAT1O14929 419 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 SYNJ2O15056 1496 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 CHUKO15111 745 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 PRKAB2O43741 272 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 TIMM8AO60220 97 aaPredicted RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 BRD4O60885 1362 aaPredicted RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 SH3BGRLO75368 114 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 CBR3O75828 277 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 NEBLO76041 1014 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 TM7SF2O76062 418 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 GNA14O95837 355 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 CST1P01037 141 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 IGHG4P01861 327 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 CA3P07451 260 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 GSTA2P09210 222 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 CCDC172P0C7W6 258 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 TROVE2P10155 538 aaKnown RBP eCLIP1.53□□□□□ -2.16
USP9X-208ENST00000487625 UQCRBP14927 111 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 TBXA2RP21731 343 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 UQCRC2P22695 453 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 EDNRAP25101 427 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 ACKR3P25106 362 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 PPP2R1AP30153 589 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 RDXP35241 583 aaKnown RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 LONP1P36776 959 aaKnown RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 SPAM1P38567 509 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 NPY2RP49146 381 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 NDST1P52848 882 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 CLDN17P56750 224 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 C21orf59P57076 290 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 SEC61GP60059 68 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 RPS15P62841 145 aaKnown RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 UBE2IP63279 158 aaKnown RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 TRAP1Q12931 704 aaKnown RBP1.53□□□□□ -2.16
USP9X-208ENST00000487625 BNIP1Q12981 228 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 RUNX3Q13761 415 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 CEACAM7Q14002 265 aa1.53□□□□□ -2.16
USP9X-208ENST00000487625 KIAA0141Q14154 515 aaPredicted RBP1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms