RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ADIPOR1Q96A54 375 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 DNAJA3Q96EY1 480 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 ATOH8Q96SQ7 321 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF416Q9BWM5 594 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 MRPL13Q9BYD1 178 aaKnown RBP3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 LPAR2Q9HBW0 351 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 PALMDQ9NP74 551 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 C1orf123Q9NWV4 160 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 CGNQ9P2M7 1197 aaKnown RBP3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 RNF24Q9Y225 148 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 KIF3AQ9Y496 699 aa3.93□□□□□ -1.78
PRPF38A-203ENST00000487160 A0A1B0GU03 582 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 TRABD2BA6NFA1 517 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 C11orf98E9PRG8 122 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 E2F3O00716 465 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 BBOX1O75936 387 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 MBD3O95983 291 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 CGAP01215 116 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 IGHV3-9P01782 118 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 THRBP10828 461 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 CAPN2P17655 700 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 SHC1P29353 583 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 KIF5BP33176 963 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 HMGCLP35914 325 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 IL9RQ01113 521 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 KRTAP1-1Q07627 177 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 OVGP1Q12889 678 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 RAB35Q15286 201 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 MS4A13Q5J8X5 152 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 RIPPLY2Q5TAB7 128 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 NIPAL3Q6P499 406 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 LRRC8BQ6P9F7 803 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 PPP1R42Q7Z4L9 355 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 CENPLQ8N0S6 344 aaPredicted RBP3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 ITLN1Q8WWA0 313 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 DTNBP1Q96EV8 351 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 WBP1Q96G27 269 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 HPDLQ96IR7 371 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 ELMO2Q96JJ3 720 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 VPS35Q96QK1 796 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 TBCDQ9BTW9 1192 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 TRIM9Q9C026 710 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 TRIM6Q9C030 488 aaPredicted RBP3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 PRO3102Q9H379 93 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 AGPAT5Q9NUQ2 364 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 TMOD2Q9NZR1 351 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 SSC5DA1L4H1 1573 aa3.92□□□□□ -1.78
PRPF38A-203ENST00000487160 LAMA2P24043 3122 aaKnown RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 LRRC30A6NM36 301 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 WASHC1A8K0Z3 465 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF487B1APH4 448 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 CASKO14936 926 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 SNRPCP09234 159 aaKnown RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 HSPA5P11021 654 aaKnown RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 KRT13P13646 458 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 UQCRBP14927 111 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 DLSTP36957 453 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 BRCC3P46736 316 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 STK19P49842 368 aaPredicted RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 NAPAP54920 295 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ZFP36L1Q07352 338 aaKnown RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 COX10Q12887 443 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 CRMP1Q14194 572 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 LTB4RQ15722 352 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ZIC1Q15915 447 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 USH1GQ495M9 461 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 TMEM41BQ5BJD5 291 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 DDX60LQ5H9U9 1706 aaKnown RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF311Q5JNZ3 666 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ASPHD2Q6ICH7 369 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 BTNL3Q6UXE8 466 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 GRAMD2AQ8IUY3 354 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 FADS6Q8N9I5 356 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF485Q8NCK3 441 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF540Q8NDQ6 660 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 OR6T1Q8NGN1 323 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 RFESDQ8TAC1 157 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ZNF671Q8TAW3 534 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 C11orf24Q96F05 449 aaPredicted RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 GPA33Q99795 319 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 RPP25Q9BUL9 199 aaKnown RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 TBC1D10AQ9BXI6 508 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 AMBNQ9NP70 447 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 MYOZ2Q9NPC6 264 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 RAI14Q9P0K7 980 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 DHRS4-AS1Q9P1J3 65 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 ARMCX1Q9P291 453 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 LAMP5Q9UJQ1 280 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 B9D1Q9UPM9 204 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 EXOSC1Q9Y3B2 195 aaKnown RBP3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 GON4LQ3T8J9 2241 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 AK9Q5TCS8 1911 aa3.91□□□□□ -1.78
PRPF38A-203ENST00000487160 IGHV3OR16-12A0A075B7B8 117 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 A0A1B0GWJ7 208 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 ZSCAN5CA6NGD5 496 aaPredicted RBP3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 PHF1O43189 567 aaPredicted RBP3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 PVRP15151 417 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 PRKAR2BP31323 418 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 NF2P35240 595 aa3.9□□□□□ -1.79
PRPF38A-203ENST00000487160 NUCB2P80303 420 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms