RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TAS2R50P59544 299 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 PMS2P3Q13401 168 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 GPR176Q14439 515 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 GRB7Q14451 532 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 ZNF273Q14593 569 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 EXT1Q16394 746 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 NDUFA9Q16795 377 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 HKDC1Q2TB90 917 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 C3orf36Q3SXR2 165 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 GCNT6Q5T4J0 391 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SPINK14Q6IE38 97 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 C1orf94Q6P1W5 598 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 LRRC8BQ6P9F7 803 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 ARSKQ6UWY0 536 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 FRA10AC1Q70Z53 315 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 CPEB2Q7Z5Q1 589 aaKnown RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 PLCZ1Q86YW0 608 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SIAH3Q8IW03 269 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 FAM185AQ8N0U4 392 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 GPR137CQ8N3F9 429 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SLC5A8Q8N695 610 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 CSNK1A1LQ8N752 337 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SNX31Q8N9S9 440 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 OR2L3Q8NG85 312 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 HMGCLL1Q8TB92 370 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 FAM57AQ8TBR7 257 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 M1APQ8TC57 530 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 LRRC20Q8TCA0 184 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 MAGEC3Q8TD91 643 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 CKAP2Q8WWK9 683 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 RND1Q92730 232 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 RERGQ96A58 199 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 C3orf49Q96BT1 292 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 NMD3Q96D46 503 aaKnown RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 RCC1LQ96I51 464 aaKnown RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 C10orf90Q96M02 699 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 FOPNLQ96NB1 174 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 DGAT2Q96PD7 388 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 OPALINQ96PE5 141 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SIGLEC12Q96PQ1 595 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 INTS14Q96SY0 518 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 OLFM1Q99784 485 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 DPH7Q9BTV6 452 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 MRPL1Q9BYD6 325 aaKnown RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 GCM1Q9NP62 436 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 PPANQ9NQ55 473 aaKnown RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 G6PC2Q9NQR9 355 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 MAN2C1Q9NTJ4 1040 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 ERVK13-1Q9NX77 482 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 PRR13Q9NZ81 148 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 NDUFA13Q9P0J0 144 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SH3BP4Q9P0V3 963 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 STOX2Q9P2F5 926 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 MGAT4CQ9UBM8 478 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SPATA2Q9UM82 520 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 GPR55Q9Y2T6 319 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-209ENST00000486618 ASB1Q9Y576 335 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 PCDHA3Q9Y5H8 950 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 MPDZO75970 2070 aa6.26□□□□□ -1.41
HDAC3-209ENST00000486618 SCN3AQ9NY46 2000 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 A0A0A6YYC8 382 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 OR2A25A4D2G3 310 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 NKX2-6A6NCS4 301 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 FAM90A27PA6NNH2 459 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 GABRR3A8MPY1 467 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 I3L1I5 382 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CYR61O00622 381 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 FFAR3O14843 346 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 TFECO14948 347 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 GPR42O15529 346 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 PSMD3O43242 534 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ARHGEF9O43307 516 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 TOXO94900 526 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 MATN4O95460 622 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 KRT6AP02538 564 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 TPH1P17752 444 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 COMTP21964 271 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 POU1F1P28069 291 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 GABRB3P28472 473 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 HMOX2P30519 316 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CCR7P32248 378 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 MSX2P35548 267 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 RPS16P62249 146 aaKnown RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 NKX6-1P78426 367 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 HSF1Q00613 529 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 LTBQ06643 244 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 FAM53BQ14153 422 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 FASTKQ14296 549 aaKnown RBP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 POU6F1Q14863 301 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 SF3B4Q15427 424 aaKnown RBP eCLIP6.25□□□□□ -1.41
HDAC3-209ENST00000486618 SPA17Q15506 151 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CCDC58Q4VC31 144 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 CT83Q5H943 113 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 IL23RQ5VWK5 629 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 STEAP3Q658P3 488 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 FBXO42Q6P3S6 717 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 IL20RBQ6UXL0 311 aa6.25□□□□□ -1.41
HDAC3-209ENST00000486618 ETV3LQ6ZN32 361 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms