RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ARHGEF9O43307 516 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 SMPD2O60906 423 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 SPAG7O75391 227 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 LINGO3P0C6S8 592 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 PPP3CBP16298 524 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 FPR1P21462 350 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 ME2P23368 584 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 ARRB2P32121 409 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 EIF1P41567 113 aaKnown RBP20.06■□□□□ 0.8
SREBF1-214ENST00000486311 PTGR1Q14914 329 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 ATP6AP1LQ52LC2 224 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 C6orf136Q5SQH8 315 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 PDSS1Q5T2R2 415 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 ANKRD34AQ69YU3 496 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 MTERF4Q7Z6M4 381 aaKnown RBP20.06■□□□□ 0.8
SREBF1-214ENST00000486311 NATD1Q8N6N6 113 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 OR56A1Q8NGH5 318 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 COQ8BQ96D53 544 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 CHMP6Q96FZ7 201 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 C3orf30Q96M34 536 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 HS3ST6Q96QI5 342 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 ACTRT3Q9BYD9 372 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 HOXD1Q9GZZ0 328 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 TMEM185BQ9H7F4 350 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 UBTD1Q9HAC8 227 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 ATAD3AQ9NVI7 634 aa20.06■□□□□ 0.8
SREBF1-214ENST00000486311 THBDP07204 575 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 ATP6V1C1P21283 382 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 CCT3P49368 545 aaKnown RBP20.05■□□□□ 0.8
SREBF1-214ENST00000486311 ZNF117Q03924 483 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 IFFO1Q0D2I5 559 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 HBMQ6B0K9 141 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 LILRA2Q8N149 483 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 KLHL15Q96M94 604 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 C1orf50Q9BV19 199 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 ROPN1BQ9BZX4 212 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-214ENST00000486311 CXorf36Q9H7Y0 433 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 ROPN1Q9HAT0 212 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-214ENST00000486311 GPATCH2Q9NW75 528 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 ZDHHC2Q9UIJ5 367 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 PCNX3Q9H6A9 2034 aa20.05■□□□□ 0.8
SREBF1-214ENST00000486311 DYNC1I1O14576 645 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 SOX30O94993 753 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 KRT16P08779 473 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 ELK4P28324 431 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 FOXF1Q12946 379 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 LSM12Q3MHD2 195 aaKnown RBP20.04■□□□□ 0.8
SREBF1-214ENST00000486311 KLHL26Q53HC5 615 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 Q5PR19 223 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 IL23RQ5VWK5 629 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 STAC2Q6ZMT1 411 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 C20orf204Q6ZNR8 217 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 P3H2Q8IVL5 708 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 FNDC5Q8NAU1 212 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 ZNF527Q8NB42 609 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 PHOSPHO1Q8TCT1 267 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 ADAMTS15Q8TE58 950 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 OSTF1Q92882 214 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 PRPF18Q99633 342 aaKnown RBP20.04■□□□□ 0.8
SREBF1-214ENST00000486311 FANCFQ9NPI8 374 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 FAF1Q9UNN5 650 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-214ENST00000486311 ACTL7BQ9Y614 415 aa20.04■□□□□ 0.8
SREBF1-214ENST00000486311 OIP5O43482 229 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 C6orf47O95873 294 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 INHBBP09529 407 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 NID1P14543 1247 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 PRPS1L1P21108 318 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 ADH6P28332 368 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 SUMO3P55854 103 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-214ENST00000486311 CARD18P57730 90 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 TP53BP2Q13625 1128 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 SPDYE7PQ495Y7 208 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 DCST2Q5T1A1 773 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 GTF2IRD2BQ6EKJ0 949 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 BEND4Q6ZU67 534 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 HDXQ7Z353 690 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 CROCCP2Q86T23 111 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 GTF2IRD2Q86UP8 949 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 RIMKLAQ8IXN7 391 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 KRTCAP2Q8N6L1 136 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 SFXN5Q8TD22 340 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 NUDT8Q8WV74 236 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 MOAP1Q96BY2 351 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 CCL19Q99731 98 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 SMR3AQ99954 134 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 ICAM5Q9UMF0 924 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 KCNE3Q9Y6H6 103 aa20.03■□□□□ 0.8
SREBF1-214ENST00000486311 NPIPA5A0A0B4J1W7 369 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 NPIPA7E9PJI5 369 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 NPIPB9F8W1W9 429 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 H3BNH8 94 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 KLF4O43474 513 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 SKAP2O75563 359 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-214ENST00000486311 BPGMP07738 259 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 PABPC4LP0CB38 370 aaKnown RBP20.02■□□□□ 0.8
SREBF1-214ENST00000486311 NPIPA8P0DM63 369 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 SHC1P29353 583 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 AGTR1P30556 359 aa20.02■□□□□ 0.8
SREBF1-214ENST00000486311 ADSLP30566 484 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-214ENST00000486311 P2RX1P51575 399 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms