RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 TADA1Q96BN2 335 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 TBC1D31Q96DN5 1066 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 ELMO2Q96JJ3 720 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 VSTM2LQ96N03 204 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 IL4I1Q96RQ9 567 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 TESK2Q96S53 571 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 FICDQ9BVA6 458 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 TSSK1BQ9BXA7 367 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 TBC1D10AQ9BXI6 508 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 GPN2Q9H9Y4 310 aaPredicted RBP2.04□□□□□ -2.08
GCFC2-209ENST00000486016 LIN28AQ9H9Z2 209 aaKnown RBP2.04□□□□□ -2.08
GCFC2-209ENST00000486016 LPAR2Q9HBW0 351 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 MEPEQ9NQ76 525 aaPredicted RBP2.04□□□□□ -2.08
GCFC2-209ENST00000486016 POLE3Q9NRF9 147 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 MTCL1Q9Y4B5 1905 aaKnown RBP2.04□□□□□ -2.08
GCFC2-209ENST00000486016 PPIAL4AQ9Y536 164 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 U3KQV3 271 aa2.04□□□□□ -2.08
GCFC2-209ENST00000486016 METP08581 1390 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 CCDC7Q96M83 1385 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 GRIN2DO15399 1336 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 A0A087WZY1 265 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 A0A1B0GUL7 405 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 WASHC1A8K0Z3 465 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 K7EPI3 171 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 SDHDO14521 159 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 CASKO14936 926 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 PPIHO43447 177 aaKnown RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 SMPD2O60906 423 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 OR4F21O95013 312 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 IFNB1P01574 187 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 JCHAINP01591 159 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 SEMG1P04279 462 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 IGFBP1P08833 259 aaPredicted RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 THRBP10828 461 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 NCF1P14598 390 aaPredicted RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 UQCRBP14927 111 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 SDC1P18827 310 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 IL18R1Q13478 541 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 GPNMBQ14956 572 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 TRIP10Q15642 601 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 ZNF630Q2M218 657 aaPredicted RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 OR2B11Q5JQS5 317 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 LGSNQ5TDP6 509 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 GPR157Q5UAW9 335 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 SLX4IPQ5VYV7 408 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 TMEM184AQ6ZMB5 413 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 PARGQ86W56 976 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 CBWD2Q8IUF1 395 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 GCNT2Q8N0V5 402 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 LYPD1Q8N2G4 141 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 ZBTB44Q8NCP5 570 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 UPRTQ96BW1 309 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 C16orf45Q96MC5 204 aaPredicted RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 TBCDQ9BTW9 1192 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 MRPL13Q9BYD1 178 aaKnown RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 DPH5Q9H2P9 285 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 GLIPR2Q9H4G4 154 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 COQ10BQ9H8M1 238 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 EXOSC3Q9NQT5 275 aaKnown RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 AGPAT5Q9NUQ2 364 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 RBM28Q9NW13 759 aaKnown RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 ELOVL2Q9NXB9 296 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 ZNF282Q9UDV7 671 aaPredicted RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 ISY1Q9ULR0 285 aaKnown RBP2.03□□□□□ -2.08
GCFC2-209ENST00000486016 DUSP12Q9UNI6 340 aa2.03□□□□□ -2.08
GCFC2-209ENST00000486016 CLDN3O15551 220 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 RAMP1O60894 148 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 ANXA3P12429 323 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 XRCC1P18887 633 aaPredicted RBP2.02□□□□□ -2.09
GCFC2-209ENST00000486016 HTR1FP30939 366 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 ACVR1BP36896 505 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 MDH1P40925 334 aaKnown RBP2.02□□□□□ -2.09
GCFC2-209ENST00000486016 EMDP50402 254 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 NAPAP54920 295 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 PLOD1Q02809 727 aaPredicted RBP2.02□□□□□ -2.09
GCFC2-209ENST00000486016 PUDPQ08623 228 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 EGFEM1PQ0D2K5 195 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 ELAVL3Q14576 367 aaKnown RBP2.02□□□□□ -2.09
GCFC2-209ENST00000486016 CAMK4Q16566 473 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 TMEM52BQ4KMG9 183 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 LINC01620Q4KN68 170 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 HSP90AA5PQ58FG0 334 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 ZNF311Q5JNZ3 666 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 ZNF57Q68EA5 555 aaPredicted RBP2.02□□□□□ -2.09
GCFC2-209ENST00000486016 NIPAL3Q6P499 406 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 AFTPHQ6ULP2 937 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 CXCL17Q6UXB2 119 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 CYS1Q717R9 158 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 ARIH2OSQ8N7S6 290 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 STKLD1Q8NE28 680 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 OR5AU1Q8NGC0 362 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 C18orf25Q96B23 403 aaPredicted RBP2.02□□□□□ -2.09
GCFC2-209ENST00000486016 HPDLQ96IR7 371 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 VPS35Q96QK1 796 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 NRTNQ99748 197 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 TMEM121Q9BTD3 319 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 COMMD4Q9H0A8 199 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 GLT8D2Q9H1C3 349 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 SLC25A51Q9H1U9 297 aa2.02□□□□□ -2.09
GCFC2-209ENST00000486016 UTP6Q9NYH9 597 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms