RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 ZNF607Q96SK3 696 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 UGT2B28Q9BY64 529 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 TP63Q9H3D4 680 aaPredicted RBP15.57■□□□□ 0.08
VIM-205ENST00000485947 POLE3Q9NRF9 147 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 ADPRHL2Q9NX46 363 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 BOKQ9UMX3 212 aaPredicted RBP15.57■□□□□ 0.08
VIM-205ENST00000485947 ITPR3Q14573 2671 aa15.57■□□□□ 0.08
VIM-205ENST00000485947 A0A0G2JPF8 293 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 DHRS12A0PJE2 317 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 HNRNPCL2B2RXH8 293 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 HNRNPCL3B7ZW38 293 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 PRSS44E7EML9 344 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 BCKDKO14874 412 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 ZNF354AO60765 605 aaPredicted RBP15.56■□□□□ 0.08
VIM-205ENST00000485947 PGM3O95394 542 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 SERPINA1P01009 418 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 GUSBP08236 651 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 HNRNPCL4P0DMR1 293 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 SLC7A1P30825 629 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 POU6F2P78424 691 aaPredicted RBP15.56■□□□□ 0.08
VIM-205ENST00000485947 HPCAP84074 193 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 FUT5Q11128 374 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 FOXO1Q12778 655 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 MAPK11Q15759 364 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 SYPL1Q16563 259 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 SP5Q6BEB4 398 aaPredicted RBP15.56■□□□□ 0.08
VIM-205ENST00000485947 EIF3MQ7L2H7 374 aaKnown RBP15.56■□□□□ 0.08
VIM-205ENST00000485947 FGD2Q7Z6J4 655 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 KRT73Q86Y46 540 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 COX18Q8N8Q8 333 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 RASSF5Q8WWW0 418 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 PMM1Q92871 262 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 CDS1Q92903 461 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 BTBD9Q96Q07 612 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 GAL3ST4Q96RP7 486 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 DMRTA2Q96SC8 542 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 MAGIXQ9H6Y5 334 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 RNPEPL1Q9HAU8 725 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 Q9N2J8 555 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 CCM2LQ9NUG4 571 aaPredicted RBP15.56■□□□□ 0.08
VIM-205ENST00000485947 SH3BGRL2Q9UJC5 107 aa15.56■□□□□ 0.08
VIM-205ENST00000485947 DSPPQ9NZW4 1301 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 PRAMEF27A3QJZ7 478 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 HCN1O60741 890 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 KRT36O76013 467 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 SNX4O95219 450 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 HOXD4P09016 255 aaPredicted RBP15.55■□□□□ 0.08
VIM-205ENST00000485947 CCL3P10147 92 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 ETS2P15036 469 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 COL8A1P27658 744 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 PPICP45877 212 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 ERFP50548 548 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 ADORA2A-AS1P86434 159 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 PSG6Q00889 435 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 SLC10A1Q14973 349 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 FAM98BQ52LJ0 330 aaKnown RBP15.55■□□□□ 0.08
VIM-205ENST00000485947 GPAT3Q53EU6 434 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 SLC44A2Q8IWA5 706 aaPredicted RBP15.55■□□□□ 0.08
VIM-205ENST00000485947 ADGRG5Q8IZF4 528 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 ANKFN1Q8N957 763 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 GPR151Q8TDV0 419 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 CANT1Q8WVQ1 401 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 PYDC1Q8WXC3 89 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 ADIPOR1Q96A54 375 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 OTUB1Q96FW1 271 aaPredicted RBP15.55■□□□□ 0.08
VIM-205ENST00000485947 SPATA5L1Q9BVQ7 753 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 ITPAQ9BY32 194 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 ZFP64Q9NPA5 681 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 ARMC1Q9NVT9 282 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 COQ3Q9NZJ6 369 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 CHCHD2Q9Y6H1 151 aaPredicted RBP15.55■□□□□ 0.08
VIM-205ENST00000485947 KCNE3Q9Y6H6 103 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 GTF3C1Q12789 2109 aa15.55■□□□□ 0.08
VIM-205ENST00000485947 PINLYPA6NC86 204 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 AQP7O14520 342 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 ADAM10O14672 748 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 ACOX3O15254 700 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 CDC40O60508 579 aaKnown RBP eCLIP15.54■□□□□ 0.08
VIM-205ENST00000485947 GCM2O75603 506 aaPredicted RBP15.54■□□□□ 0.08
VIM-205ENST00000485947 SERPINB7O75635 380 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 H6PDO95479 791 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 CLDN14O95500 239 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 TPOP07202 933 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 CHRM4P08173 479 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 GABRA3P34903 492 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 PTGER4P35408 488 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 RFC3P40938 356 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 HSF1Q00613 529 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 CHRNB3Q05901 458 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 RCN1Q15293 331 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 DCST2Q5T1A1 773 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 AP1ARQ63HQ0 302 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 ZNF787Q6DD87 383 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 TMEM81Q6P7N7 255 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 WDR53Q7Z5U6 358 aaPredicted RBP15.54■□□□□ 0.08
VIM-205ENST00000485947 TMEM251Q8N6I4 163 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 PAPD5Q8NDF8 572 aaKnown RBP15.54■□□□□ 0.08
VIM-205ENST00000485947 ASB5Q8WWX0 329 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 LZICQ8WZA0 190 aa15.54■□□□□ 0.08
VIM-205ENST00000485947 HSPBAP1Q96EW2 488 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms