RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TOR1AIP2Q8NFQ8 470 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 MBD3L2Q8NHZ7 208 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 INTS12Q96CB8 462 aaKnown RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 RNF145Q96MT1 663 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 SPOCK3Q9BQ16 436 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 PINK1Q9BXM7 581 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 CACYBPQ9HB71 228 aaKnown RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 NPHS2Q9NP85 383 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 POLE3Q9NRF9 147 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 DCTN4Q9UJW0 460 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 LIPT1Q9Y234 373 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 GTF3C1Q12789 2109 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 SLC22A20A6NK97 555 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 H0YC42 278 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 HMGN4O00479 90 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 EIF4E2O60573 245 aaKnown RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 RCBTB2O95199 551 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 SYNGR4O95473 234 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 H6PDO95479 791 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 OPN1LWP04000 364 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 EIF1P41567 113 aaKnown RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 EIF1AXP47813 144 aaKnown RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF136P52737 540 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 SUCLG1P53597 346 aaKnown RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 TPD52P55327 224 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 SUMO3P55854 103 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 CLDN15P56746 228 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 CLDN20P56880 219 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 SQLEQ14534 574 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF141Q15928 474 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 SYPL1Q16563 259 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 PLPPR5Q32ZL2 321 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 AGKQ53H12 422 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 HEPHL1Q6MZM0 1159 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 GDF7Q7Z4P5 450 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 GTPBP8Q8N3Z3 284 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 NAXEQ8NCW5 288 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 ATP6V1C2Q8NEY4 427 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 OR5W2Q8NH69 310 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 SPDL1Q96EA4 605 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 ZFP3Q96NJ6 502 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF350Q9GZX5 532 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 LAT2Q9GZY6 243 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 RAD21L1Q9H4I0 556 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 RABEP2Q9H5N1 569 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 TMEM185BQ9H7F4 350 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 TPT1P8Q9HAU6 139 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 CCDC167Q9P0B6 97 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 CLCF1Q9UBD9 225 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 USP9XQ93008 2570 aaPredicted RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 DIDO1Q9BTC0 2240 aaKnown RBP11.29□□□□□ -0.6
PTCD1-205ENST00000485746 HECTD1Q9ULT8 2610 aa11.29□□□□□ -0.6
PTCD1-205ENST00000485746 FLNBO75369 2602 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 ICE1Q9Y2F5 2266 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 A0A0G2JND7 137 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 NPIPB9F8W1W9 429 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 OIP5O43482 229 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 EDF1O60869 148 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 UGT2B17O75795 530 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 IL18BPO95998 194 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 VIMP08670 466 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 UBTFL6P0CB48 400 aaPredicted RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 PGCP20142 388 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 SFTPDP35247 375 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 CPA2P48052 419 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 ASCL1P50553 236 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 RAC1P63000 192 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 EEF1A1P68104 462 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 IRX1P78414 480 aaPredicted RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 CHRNEQ04844 493 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 FOXF1Q12946 379 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 MYBPHQ13203 477 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 GNA13Q14344 377 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 PON3Q15166 354 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 COX20Q5RI15 118 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 EEF1A1P5Q5VTE0 462 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 OR2A2Q6IF42 318 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 TYW3Q6IPR3 259 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 SLC2A7Q6PXP3 512 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 LRRC74BQ6ZQY2 392 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 HMGN2P46Q86SG4 172 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 GCNT2Q8N0V5 402 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 ANKFN1Q8N957 763 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 CNEP1R1Q8N9A8 125 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 FBXO27Q8NI29 283 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF563Q8TA94 476 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 GPR119Q8TDV5 335 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 ZFP90Q8TF47 636 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 REXO5Q96IC2 774 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 THUMPD3Q9BV44 507 aaKnown RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 SFXN3Q9BWM7 321 aa11.28□□□□□ -0.6
PTCD1-205ENST00000485746 MTHFD2LQ9H903 347 aaPredicted RBP11.28□□□□□ -0.6
PTCD1-205ENST00000485746 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms