RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PIGQQ9BRB3 760 aa14.67□□□□□ -0.06
DDR1-246ENST00000485023 TMEM185BQ9H7F4 350 aa14.67□□□□□ -0.06
DDR1-246ENST00000485023 SPTBN1Q01082 2364 aaKnown RBP14.66□□□□□ -0.06
DDR1-246ENST00000485023 SERINC4A6NH21 518 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 TROVE2P10155 538 aaKnown RBP eCLIP14.66□□□□□ -0.06
DDR1-246ENST00000485023 MSX1P28360 303 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 MRPL19P49406 292 aaKnown RBP14.66□□□□□ -0.06
DDR1-246ENST00000485023 ANXA11P50995 505 aaKnown RBP14.66□□□□□ -0.06
DDR1-246ENST00000485023 ATP4BP51164 291 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 CLDN20P56880 219 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 CHRNEQ04844 493 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 FOXF1Q12946 379 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 MAPK14Q16539 360 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 PLPPR5Q32ZL2 321 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 RIPPLY2Q5TAB7 128 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 NSUN5P2Q63ZY6 315 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 CGB2Q6NT52 195 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 FRRS1Q6ZNA5 592 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 MTERF4Q7Z6M4 381 aaKnown RBP14.66□□□□□ -0.06
DDR1-246ENST00000485023 LIX1LQ8IVB5 337 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 ZNF619Q8N2I2 560 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 C9orf106Q8NAJ2 232 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 NMUR2Q9GZQ4 415 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 PAIP1Q9H074 479 aaKnown RBP14.66□□□□□ -0.06
DDR1-246ENST00000485023 TPT1P8Q9HAU6 139 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 L3MBTL1Q9Y468 752 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 FREM3P0C091 2139 aa14.66□□□□□ -0.06
DDR1-246ENST00000485023 A0A087WZY1 265 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 ZNF264O43296 627 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 CSTAP01040 98 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 CHRM4P08173 479 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 UBTFL6P0CB48 400 aaPredicted RBP14.65□□□□□ -0.06
DDR1-246ENST00000485023 NR2F1P10589 423 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 PEPDP12955 493 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 BMP5P22003 454 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 AGFG1P52594 562 aaKnown RBP14.65□□□□□ -0.06
DDR1-246ENST00000485023 SUCLG1P53597 346 aaKnown RBP14.65□□□□□ -0.06
DDR1-246ENST00000485023 MVDP53602 400 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 DSTNP60981 165 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 SF3B4Q15427 424 aaKnown RBP eCLIP14.65□□□□□ -0.069e-6■■□□□ 14.4
DDR1-246ENST00000485023 TOMM34Q15785 309 aaPredicted RBP14.65□□□□□ -0.06
DDR1-246ENST00000485023 ZNF141Q15928 474 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 PAGE3Q5JUK9 113 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 PPP4R4Q6NUP7 873 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 MEIOBQ8N635 442 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 LILRB4Q8NHJ6 448 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 ZPLD1Q8TCW7 415 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 ZG16BQ96DA0 208 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 SIKE1Q9BRV8 207 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 RUBCNLQ9H714 662 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 HHATLQ9HCP6 504 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 KCNJ16Q9NPI9 418 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 SLAMF8Q9P0V8 285 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 ICAM5Q9UMF0 924 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 TRIM33Q9UPN9 1127 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 PCDHB14Q9Y5E9 798 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 NUP214P35658 2090 aaPredicted RBP14.65□□□□□ -0.06
DDR1-246ENST00000485023 KIAA1549Q9HCM3 1950 aa14.65□□□□□ -0.06
DDR1-246ENST00000485023 A0A096LPI6 279 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 CD8B2A6NJW9 211 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 CLDN24A6NM45 220 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 EIF1AYO14602 144 aaKnown RBP14.64□□□□□ -0.07
DDR1-246ENST00000485023 BCAS1O75363 584 aaPredicted RBP14.64□□□□□ -0.07
DDR1-246ENST00000485023 IL2RAP01589 272 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 BCHEP06276 602 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 ZCCHC18P0CG32 403 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 ZNF17P17021 662 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 IL11P20809 199 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 P2RX1P51575 399 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 CLDN15P56746 228 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 SKP2Q13309 424 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 TMEM44Q2T9K0 475 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 RPS26P11Q5JNZ5 115 aaPredicted RBP14.64□□□□□ -0.07
DDR1-246ENST00000485023 CHMP1BQ7LBR1 199 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 P4HA3Q7Z4N8 544 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 GRAMD2AQ8IUY3 354 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 GCNT2Q8N0V5 402 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 POC1BQ8TC44 478 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 ZBTB8AQ96BR9 441 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 ZNF845Q96IR2 970 aaPredicted RBP14.64□□□□□ -0.07
DDR1-246ENST00000485023 SLC38A1Q9H2H9 487 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 ZNF385DQ9H6B1 395 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 SLC25A37Q9NYZ2 338 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 MED12Q93074 2177 aa14.64□□□□□ -0.07
DDR1-246ENST00000485023 MBD3L4A6NDZ8 208 aaPredicted RBP14.63□□□□□ -0.07
DDR1-246ENST00000485023 MBD3L3A6NE82 208 aaPredicted RBP14.63□□□□□ -0.07
DDR1-246ENST00000485023 MBD3L5A6NJ08 208 aaPredicted RBP14.63□□□□□ -0.07
DDR1-246ENST00000485023 HSPB2A8KAH6 182 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 CLIC1O00299 241 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 ATP8B1O43520 1251 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 TGM6O95932 706 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 NUDT7P0C024 238 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 LINGO3P0C6S8 592 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 MDH1P40925 334 aaKnown RBP14.63□□□□□ -0.07
DDR1-246ENST00000485023 ZNF136P52737 540 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 ARFIP2P53365 341 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 FGFBP1Q14512 234 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 HSPB2Q16082 182 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 BCL2A1Q16548 175 aa14.63□□□□□ -0.07
DDR1-246ENST00000485023 GLYR1Q49A26 553 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms