RNA–Protein interactions for RNA: ENST00000484683.1

RPRD1B-205, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-205ENST00000484683 ZIM2Q9NZV7 527 aa8.38□□□□□ -1.07
RPRD1B-205ENST00000484683 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
RPRD1B-205ENST00000484683 PACSIN3Q9UKS6 424 aa8.38□□□□□ -1.07
RPRD1B-205ENST00000484683 ZNF175Q9Y473 711 aa8.38□□□□□ -1.07
RPRD1B-205ENST00000484683 WDR45Q9Y484 360 aa8.38□□□□□ -1.07
RPRD1B-205ENST00000484683 GPC6Q9Y625 555 aaPredicted RBP8.38□□□□□ -1.07
RPRD1B-205ENST00000484683 USH1CQ9Y6N9 552 aa8.38□□□□□ -1.07
RPRD1B-205ENST00000484683 CREBBPQ92793 2442 aa8.38□□□□□ -1.07
RPRD1B-205ENST00000484683 C7orf72A4D263 438 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 SERINC4A6NH21 518 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 ANKRD28O15084 1053 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 SMNDC1O75940 238 aaKnown RBP eCLIP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 CSTAP01040 98 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 GUSBP08236 651 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 ALDOCP09972 364 aaKnown RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 PRF1P14222 555 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 UQCRBP14927 111 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 H2AFXP16104 143 aaPredicted RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 ELK4P28324 431 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 KCNJ5P48544 419 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 POLR2JP52435 117 aaKnown RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 AGFG1P52594 562 aaKnown RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 ZNF136P52737 540 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 CTBP2P56545 445 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 WNT3P56703 355 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 CLDN15P56746 228 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 B3GALT5-AS1P59052 145 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 PPP2R2AP63151 447 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 IRX1P78414 480 aaPredicted RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 TFF3Q07654 80 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 PON3Q15166 354 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 FBXL19-AS1Q494R0 122 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 HSP90B2PQ58FF3 399 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 EXOSC6Q5RKV6 272 aaKnown RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 C6orf10Q5SRN2 563 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 TNFAIP8L2Q6P589 184 aaPredicted RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 APOOLQ6UXV4 268 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 MSANTD1Q6ZTZ1 278 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 ADGRE4PQ86SQ3 457 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 GCNT2Q8N0V5 402 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 LILRA2Q8N149 483 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 NAXEQ8NCW5 288 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 CHDHQ8NE62 594 aaPredicted RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 OR5M1Q8NGP8 315 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 OR5W2Q8NH69 310 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 RFWD2Q8NHY2 731 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 NUDT8Q8WV74 236 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 NEURL3Q96EH8 262 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 MAELQ96JY0 434 aaKnown RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 RNF145Q96MT1 663 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 RBM24Q9BX46 236 aaKnown RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 RTN4RQ9BZR6 473 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 TRIM8Q9BZR9 551 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 RAD21L1Q9H4I0 556 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 RABEP2Q9H5N1 569 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 ARMC7Q9H6L4 198 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 TCF7L2Q9NQB0 619 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 NPDC1Q9NQX5 325 aaPredicted RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 GLRX2Q9NS18 164 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 FBXO34Q9NWN3 711 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 CALML5Q9NZT1 146 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 MKLN1Q9UL63 735 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 SLC35A3Q9Y2D2 325 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 CARD8Q9Y2G2 431 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 EMC9Q9Y3B6 208 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 GPR45Q9Y5Y3 372 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 SPIN1Q9Y657 262 aaPredicted RBP8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 PKDREJQ9NTG1 2253 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 CACNA1DQ01668 2161 aa8.37□□□□□ -1.07
RPRD1B-205ENST00000484683 EML6Q6ZMW3 1958 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 NPIPA5A0A0B4J1W7 369 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 NPIPA7E9PJI5 369 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 MSTNO14793 375 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 SCN2BO60939 215 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 UBTFL6P0CB48 400 aaPredicted RBP8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 NPIPA8P0DM63 369 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 NR2F1P10589 423 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 IGFBP2P18065 325 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 PGCP20142 388 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 FKBP2P26885 142 aaKnown RBP8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 SLC7A1P30825 629 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 CRATP43155 626 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 CASP9P55211 416 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 CLDN20P56880 219 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 CARD18P57730 90 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 SORDQ00796 357 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 ZNF117Q03924 483 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 CD226Q15762 336 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 PLPPR5Q32ZL2 321 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 SLC9B1Q4ZJI4 515 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 PDZK1Q5T2W1 519 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 SAXO2Q658L1 398 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 HBMQ6B0K9 141 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 EPGNQ6UW88 154 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 ZAR1Q86SH2 424 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 LUZP2Q86TE4 346 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 STK32CQ86UX6 486 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 RNF130Q86XS8 419 aa8.36□□□□□ -1.07
RPRD1B-205ENST00000484683 PEX5LQ8IYB4 626 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms