RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 CHD4Q14839 1912 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 PCNTO95613 3336 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 ACOD1A6NK06 481 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 RNF212BA8MTL3 300 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 CXCL11O14625 94 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 BCAS1O75363 584 aaPredicted RBP5.29□□□□□ -1.56
UBR3-210ENST00000484596 MT-ND1P03886 318 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 PBLDP30039 288 aaPredicted RBP5.29□□□□□ -1.56
UBR3-210ENST00000484596 SAA4P35542 130 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 PTGER3P43115 390 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 GSTO1P78417 241 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 SELPLGQ14242 412 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 SLC1A5Q15758 541 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 C9orf66Q5T8R8 295 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 PNCKQ6P2M8 343 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 LRRC49Q8IUZ0 686 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 ZNF679Q8IYX0 411 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 SPEM1Q8N4L4 309 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 CSNK1G2-AS1Q8NCQ2 148 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 OR52J3Q8NH60 311 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 RAET1EQ8TD07 263 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 TOMM40LQ969M1 308 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 ADIPOR1Q96A54 375 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 UPRTQ96BW1 309 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 BIRC7Q96CA5 298 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 CCT7Q99832 543 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 ANP32EQ9BTT0 268 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 LRRC40Q9H9A6 602 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 GNB4Q9HAV0 340 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 CIDEBQ9UHD4 219 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 ZNF346Q9UL40 294 aaKnown RBP5.29□□□□□ -1.56
UBR3-210ENST00000484596 DHRS7Q9Y394 339 aa5.29□□□□□ -1.56
UBR3-210ENST00000484596 NFAT5O94916 1531 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 BTAF1O14981 1849 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 PPIAL4CA0A0B4J2A2 164 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 GSAPA4D1B5 854 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 MBLAC1A4D2B0 266 aaPredicted RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 CTAGE5O15320 804 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 PDE5AO76074 875 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 HOXD4P09016 255 aaPredicted RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 PPIAL4GP0DN37 164 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 SLC7A2P52569 658 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 PJVKQ0ZLH3 352 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 EMBQ6PCB8 327 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 TMEM184AQ6ZMB5 413 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 EIF1ADQ8N9N8 165 aaKnown RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 ZNRF1Q8ND25 227 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 SPRYD4Q8WW59 207 aaPredicted RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 DHTKD1Q96HY7 919 aaPredicted RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 CCDC28BQ9BUN5 200 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 TBC1D10AQ9BXI6 508 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 VCX2Q9H322 139 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 LIME1Q9H400 295 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 ELL3Q9HB65 397 aaPredicted RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 RBM28Q9NW13 759 aaKnown RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 RAI14Q9P0K7 980 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 C6orf203Q9P0P8 240 aaPredicted RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 RNF14Q9UBS8 474 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 MRPL11Q9Y3B7 192 aaKnown RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 CPQQ9Y646 472 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 SSH2Q76I76 1423 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 POLR3AO14802 1390 aaPredicted RBP5.28□□□□□ -1.56
UBR3-210ENST00000484596 KIAA0232Q92628 1395 aa5.28□□□□□ -1.56
UBR3-210ENST00000484596 SALL1Q9NSC2 1324 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 UBXN8O00124 270 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 PDLIM1O00151 329 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 OR1F1O43749 312 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 NUDT21O43809 227 aaKnown RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 LY75O60449 1722 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 GALR3O60755 368 aaPredicted RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 CRLF1O75462 422 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 NEBLO76041 1014 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 CCDC159P0C7I6 412 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 GATA1P15976 413 aaPredicted RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 ACADSP16219 412 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 VCPP55072 806 aaKnown RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 KRTAP10-3P60369 221 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 HAND2P61296 217 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 CD226Q15762 336 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 CAMK4Q16566 473 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 VWA2Q5GFL6 755 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 SEL1L3Q68CR1 1132 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 PMF1Q6P1K2 205 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 DPY19L4Q7Z388 723 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 TSEN54Q7Z6J9 526 aaKnown RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 SLC25A42Q86VD7 318 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 CCDC71Q8IV32 467 aaPredicted RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 POM121L12Q8N7R1 296 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 CTNNBL1Q8WYA6 563 aaPredicted RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 ART4Q93070 314 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 PSKH2Q96QS6 385 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 EDEM2Q9BV94 578 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 ADNPQ9H2P0 1102 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 GPN2Q9H9Y4 310 aaPredicted RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 MEAF6Q9HAF1 191 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 IL1RL2Q9HB29 575 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 FBXO7Q9Y3I1 522 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 ASB3Q9Y575 518 aa5.27□□□□□ -1.57
UBR3-210ENST00000484596 FAM208AQ9UK61 1670 aaKnown RBP5.27□□□□□ -1.57
UBR3-210ENST00000484596 IGHV3-16A0A0C4DH30 117 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms