RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 LRRTM2O43300 516 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 CACNG3O60359 315 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 DUS4LO95620 317 aaKnown RBP3.67□□□□□ -1.82
VPS13A-211ENST00000484581 ALPIP09923 528 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 NCK1P16333 377 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 CYP2B6P20813 491 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 CAPGP40121 348 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 RPS8P62241 208 aaKnown RBP3.67□□□□□ -1.82
VPS13A-211ENST00000484581 RPL8P62917 257 aaKnown RBP3.67□□□□□ -1.82
VPS13A-211ENST00000484581 KLRC3Q07444 240 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 PEX6Q13608 980 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 SLC25A52Q3SY17 297 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 C14orf28Q4W4Y0 310 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 LGSNQ5TDP6 509 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 WSCD1Q658N2 575 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 KDM7AQ6ZMT4 941 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 PRSS48Q7RTY5 328 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 CCDC50Q8IVM0 306 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF614Q8N883 585 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 SUMF1Q8NBK3 374 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 FAM83FQ8NEG4 500 aaPredicted RBP3.67□□□□□ -1.82
VPS13A-211ENST00000484581 OR1L4Q8NGR5 311 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 IL1F10Q8WWZ1 152 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 FBXO17Q96EF6 278 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 MTMR9Q96QG7 549 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 ATF6BQ99941 703 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 NIPSNAP3BQ9BS92 247 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 FAM192AQ9GZU8 254 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF696Q9H7X3 374 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 YY1AP1Q9H869 796 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 ZFP14Q9HCL3 533 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 AMBNQ9NP70 447 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 DDX18Q9NVP1 670 aaKnown RBP3.67□□□□□ -1.82
VPS13A-211ENST00000484581 ELOVL2Q9NXB9 296 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 EHFQ9NZC4 300 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 IL36GQ9NZH8 169 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 NTNG1Q9Y2I2 539 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 IGLV7-46A0A075B6I9 117 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 HEATR9A2RTY3 570 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 BTBD17A6NE02 478 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 LRRIQ4A6NIV6 560 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 TMEM110-MUSTN1A8MSY1 372 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 H0YIV9 168 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 DNALI1O14645 258 aaPredicted RBP3.66□□□□□ -1.82
VPS13A-211ENST00000484581 CLDN9O95484 217 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 FGF4P08620 206 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 CCDC130P13994 396 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 PVRP15151 417 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF10P21506 573 aaPredicted RBP3.66□□□□□ -1.82
VPS13A-211ENST00000484581 LMO2P25791 158 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 UGT1A5P35504 534 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 ARHGDIAP52565 204 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 LAGE3Q14657 143 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 NECTIN1Q15223 517 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 SLC15A2Q16348 729 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 NDUFA9Q16795 377 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 CYP51A1Q16850 503 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 C17orf58Q2M2W7 97 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 TMEM30BQ3MIR4 351 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 TIGITQ495A1 244 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 BCL7AQ4VC05 210 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 VWA2Q5GFL6 755 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 FAM182AQ5T1J6 154 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 ATL3Q6DD88 541 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 OR2A2Q6IF42 318 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 LRRTM1Q86UE6 522 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 CATSPER3Q86XQ3 398 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 OR51G2Q8NGK0 314 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 KCNG3Q8TAE7 436 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 C10orf35Q96D05 121 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 SLC38A2Q96QD8 506 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 OR5B2Q96R09 309 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 TSSK1BQ9BXA7 367 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 UPF3AQ9H1J1 476 aaKnown RBP3.66□□□□□ -1.82
VPS13A-211ENST00000484581 IKZF5Q9H5V7 419 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 EXO5Q9H790 373 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 EXOSC3Q9NQT5 275 aaKnown RBP3.66□□□□□ -1.82
VPS13A-211ENST00000484581 FAM120CQ9NX05 1096 aaKnown RBP3.66□□□□□ -1.82
VPS13A-211ENST00000484581 THEGQ9P2T0 379 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 SCML2Q9UQR0 700 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 AK6Q9Y3D8 172 aaKnown RBP3.66□□□□□ -1.82
VPS13A-211ENST00000484581 NPTNQ9Y639 398 aa3.66□□□□□ -1.82
VPS13A-211ENST00000484581 PPIAL4EA0A075B759 164 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 A0A1B0GVL5 298 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 TRABD2BA6NFA1 517 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 PRKAB2O43741 272 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 IDH3BO43837 385 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 UPK3AO75631 287 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 IGHG4P01861 327 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 ALOX5P09917 674 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 PPIAL4FP0DN26 164 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 GZMAP12544 262 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 UGT1A4P22310 534 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 CD80P33681 288 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 RPL13AP40429 203 aaKnown RBP3.65□□□□□ -1.83
VPS13A-211ENST00000484581 ATP4BP51164 291 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 DUSP3P51452 185 aaPredicted RBP3.65□□□□□ -1.83
VPS13A-211ENST00000484581 ATP1B3P54709 279 aa3.65□□□□□ -1.83
VPS13A-211ENST00000484581 DPYSL3Q14195 570 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms