RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 FAM86B1Q8N7N1 296 aa12.89□□□□□ -0.35
SRSF6-202ENST00000483871 TMEM178AQ8NBL3 297 aa12.89□□□□□ -0.35
SRSF6-202ENST00000483871 TPD52L3Q96J77 140 aa12.89□□□□□ -0.35
SRSF6-202ENST00000483871 NSMCE2Q96MF7 247 aa12.89□□□□□ -0.35
SRSF6-202ENST00000483871 FRMD6Q96NE9 622 aa12.89□□□□□ -0.35
SRSF6-202ENST00000483871 SLC25A18Q9H1K4 315 aa12.89□□□□□ -0.35
SRSF6-202ENST00000483871 DCAF13Q9NV06 445 aaKnown RBP12.89□□□□□ -0.35
SRSF6-202ENST00000483871 FBXL2Q9UKC9 423 aa12.89□□□□□ -0.35
SRSF6-202ENST00000483871 B3GNT3Q9Y2A9 372 aa12.89□□□□□ -0.35
SRSF6-202ENST00000483871 SMG1Q96Q15 3661 aaKnown RBP12.88□□□□□ -0.35
SRSF6-202ENST00000483871 CDHR4A6H8M9 788 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 H3BNH8 94 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 ERVH48-1M5A8F1 160 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 HCRTR2O43614 444 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 TRIM3O75382 744 aaPredicted RBP12.88□□□□□ -0.35
SRSF6-202ENST00000483871 SNX4O95219 450 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 FESP07332 822 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 RFPL3SP0C7P2 107 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 UBL4AP11441 157 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 PRKAR1BP31321 381 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 MASP1P48740 699 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 MEOX1P50221 254 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 PMP22Q01453 160 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 SLC6A19Q695T7 634 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 ENPP6Q6UWR7 440 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 EIF3MQ7L2H7 374 aaKnown RBP12.88□□□□□ -0.35
SRSF6-202ENST00000483871 OR4D11Q8NGI4 311 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 ZNF524Q96C55 264 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 FAM173AQ9BQD7 235 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 PINK1Q9BXM7 581 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 CACYBPQ9HB71 228 aaKnown RBP12.88□□□□□ -0.35
SRSF6-202ENST00000483871 DNAJB12Q9NXW2 375 aaKnown RBP12.88□□□□□ -0.35
SRSF6-202ENST00000483871 PPP4R1LQ9P1A2 415 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 LHX6Q9UPM6 363 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 KLF13Q9Y2Y9 288 aaPredicted RBP12.88□□□□□ -0.35
SRSF6-202ENST00000483871 SH3GLB1Q9Y371 365 aa12.88□□□□□ -0.35
SRSF6-202ENST00000483871 FREM3P0C091 2139 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 LRRC3CA6NJW4 275 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 KLRC4-KLRK1H3BQV0 150 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 ZNF264O43296 627 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 LGI1O95970 557 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 IFNA14P01570 189 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 PRG2P13727 222 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 NQO1P15559 274 aaKnown RBP12.87□□□□□ -0.35
SRSF6-202ENST00000483871 RYKP34925 604 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 OR1E2P47887 323 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 HOXC5Q00444 222 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 TRAP1Q12931 704 aaKnown RBP12.87□□□□□ -0.35
SRSF6-202ENST00000483871 FLOT2Q14254 428 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 TBCELQ5QJ74 424 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 RNF220Q5VTB9 566 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 LCN8Q6JVE9 175 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 DHRS4L2Q6PKH6 230 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 PLCZ1Q86YW0 608 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 RBM45Q8IUH3 476 aaKnown RBP12.87□□□□□ -0.35
SRSF6-202ENST00000483871 LACC1Q8IV20 430 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 OR1J4Q8NGS1 313 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 TMEM41AQ96HV5 264 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 PRR14Q9BWN1 585 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 DSN1Q9H410 356 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 SDHAF3Q9NRP4 125 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 SLC35A3Q9Y2D2 325 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 PCDHGB6Q9Y5F9 930 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 NCKAP5O14513 1909 aa12.87□□□□□ -0.35
SRSF6-202ENST00000483871 TCRBV5S2A0A599 114 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 M0R3H8 397 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 SNPHO15079 494 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 SUV39H1O43463 412 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 PRKD3O94806 890 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 SKP2Q13309 424 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 TOMM34Q15785 309 aaPredicted RBP12.86□□□□□ -0.35
SRSF6-202ENST00000483871 RNFT1Q5M7Z0 435 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 TIGD3Q6B0B8 471 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 FKBP9P1Q75LS8 142 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 FAM71CQ8NEG0 241 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 BHLHE22Q8NFJ8 381 aaPredicted RBP12.86□□□□□ -0.35
SRSF6-202ENST00000483871 VANGL1Q8TAA9 524 aaPredicted RBP12.86□□□□□ -0.35
SRSF6-202ENST00000483871 MUC13Q9H3R2 512 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 ADPRHL2Q9NX46 363 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 ICAM5Q9UMF0 924 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 AP3D1O14617 1153 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 CDC40O60508 579 aaKnown RBP eCLIP12.86□□□□□ -0.35
SRSF6-202ENST00000483871 TPST2O60704 377 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 WISP2O76076 250 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 P2RX1P51575 399 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 CCR4P51679 360 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 C1orf146Q5VVC0 180 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 ZNF771Q7L3S4 317 aaPredicted RBP12.86□□□□□ -0.35
SRSF6-202ENST00000483871 MISPQ8IVT2 679 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 CMIPQ8IY22 773 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 TMCO5AQ8N6Q1 288 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 FADS6Q8N9I5 356 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 TEX19Q8NA77 164 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 Q8NA96 180 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 ZFP62Q8NB50 900 aaPredicted RBP12.86□□□□□ -0.35
SRSF6-202ENST00000483871 OR2M3Q8NG83 312 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 OR52E4Q8NGH9 312 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 OR6T1Q8NGN1 323 aa12.86□□□□□ -0.35
SRSF6-202ENST00000483871 B4GALNT2Q8NHY0 566 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms