RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 P2RX1P51575 399 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 CLDN18P56856 261 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF117Q03924 483 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 COX20Q5RI15 118 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 METTL21CQ5VZV1 264 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 TYW3Q6IPR3 259 aaKnown RBP16.62■□□□□ 0.25
SMIM4-204ENST00000482728 EIF3MQ7L2H7 374 aaKnown RBP16.62■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF619Q8N2I2 560 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 ZBTB8AQ96BR9 441 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 MED17Q9NVC6 651 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 FGFR1OP2Q9NVK5 253 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 PCDHB14Q9Y5E9 798 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 AP4B1Q9Y6B7 739 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 ARHGAP21Q5T5U3 1957 aa16.62■□□□□ 0.25
SMIM4-204ENST00000482728 NOTCH2Q04721 2471 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 A0A096LPI6 279 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 FAM90A27PA6NNH2 459 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 EIF4E2O60573 245 aaKnown RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 TNFRSF21O75509 655 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 UGT2B17O75795 530 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 CYP7B1O75881 506 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 H6PDO95479 791 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 CSTAP01040 98 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 GRNP28799 593 aaKnown RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 MDH1P40925 334 aaKnown RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 EIF1P41567 113 aaKnown RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 CCR4P51679 360 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 SUMO3P55854 103 aaPredicted RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 CHRNEQ04844 493 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 CBLN3Q6UW01 205 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 SEM1Q6ZVN7 128 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 GTPBP8Q8N3Z3 284 aaPredicted RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 TMCO5AQ8N6Q1 288 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 ANKFN1Q8N957 763 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 TNIP2Q8NFZ5 429 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 OIT3Q8WWZ8 545 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 SMPDL3BQ92485 455 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 AURKBQ96GD4 344 aaPredicted RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 TMEM120AQ9BXJ8 343 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 UCK2Q9BZX2 261 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 PAIP1Q9H074 479 aaKnown RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 SAP130Q9H0E3 1048 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 RAD21L1Q9H4I0 556 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 RUBCNLQ9H714 662 aa16.61■□□□□ 0.25
SMIM4-204ENST00000482728 MTHFD2LQ9H903 347 aaPredicted RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 INTS1Q8N201 2190 aaKnown RBP16.61■□□□□ 0.25
SMIM4-204ENST00000482728 A0A1W2PP18 115 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 TMEM247A6NEH6 219 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 CLCA1A8K7I4 914 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 KDM4EB2RXH2 506 aaPredicted RBP16.6■□□□□ 0.25
SMIM4-204ENST00000482728 SHISA8B8ZZ34 492 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 CLIC1O00299 241 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 SEC14L5O43304 696 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 OIP5O43482 229 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 KIAA0513O60268 411 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF17P17021 662 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 ME2P23368 584 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 CEACAM8P31997 349 aaPredicted RBP16.6■□□□□ 0.25
SMIM4-204ENST00000482728 ARFIP2P53365 341 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 RPS3AP61247 264 aaKnown RBP16.6■□□□□ 0.25
SMIM4-204ENST00000482728 FUT5Q11128 374 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 SYPL1Q16563 259 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 TMEM44Q2T9K0 475 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 PLPPR5Q32ZL2 321 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 NDUFAF6Q330K2 333 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 GTDC1Q4AE62 458 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 AP1ARQ63HQ0 302 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 FRRS1Q6ZNA5 592 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 LRRC74BQ6ZQY2 392 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 TOR1AIP2Q8NFQ8 470 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 WNT2BQ93097 391 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 TM9SF2Q99805 663 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.6■□□□□ 0.25
SMIM4-204ENST00000482728 THUMPD1Q9NXG2 353 aaKnown RBP16.6■□□□□ 0.25
SMIM4-204ENST00000482728 KCNE5Q9UJ90 142 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 ICAM5Q9UMF0 924 aa16.6■□□□□ 0.25
SMIM4-204ENST00000482728 UNC79Q9P2D8 2635 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 PRAMEF27A3QJZ7 478 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 C7orf72A4D263 438 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 DVL2O14641 736 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 TOXO94900 526 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 ETFAP13804 333 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 CAPN3P20807 821 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 DSTNP60981 165 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 SF3A3Q12874 501 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMIM4-204ENST00000482728 GNA13Q14344 377 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 MAPK14Q16539 360 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 ZNF787Q6DD87 383 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 P4HA3Q7Z4N8 544 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 GRAMD2AQ8IUY3 354 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 OR5W2Q8NH69 310 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 GPR119Q8TDV5 335 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 PMM1Q92871 262 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 ZG16BQ96DA0 208 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 RNF145Q96MT1 663 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 LAT2Q9GZY6 243 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 CCDC134Q9H6E4 229 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 CALML5Q9NZT1 146 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 P2RX2Q9UBL9 471 aa16.59■□□□□ 0.25
SMIM4-204ENST00000482728 SLC35A3Q9Y2D2 325 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms