RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ADAM10O14672 748 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 EIF4E2O60573 245 aaKnown RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 ADAM11O75078 769 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 E2F6O75461 281 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 CAPNS1P04632 268 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 PEX2P28328 305 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 CASP3P42574 277 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 HLCSP50747 726 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 GAS1P54826 345 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 CDH12P55289 794 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 TAS2R41P59536 307 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 RPP38P78345 283 aaKnown RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 FOXD4Q12950 439 aaPredicted RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 SKP2Q13309 424 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 OGFRL1Q5TC84 451 aaPredicted RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 BICRALQ6AI39 1079 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 CBLN3Q6UW01 205 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 PLEKHM3Q6ZWE6 761 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 GPALPP1Q8IXQ4 340 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 OR5K1Q8NHB7 308 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 DUSP19Q8WTR2 217 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 NR4A3Q92570 626 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 EME1Q96AY2 570 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 SECISBP2Q96T21 854 aaKnown RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 CIB1Q99828 191 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 ZNF559Q9BR84 538 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 FNDC11Q9BVV2 318 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 METTL7AQ9H8H3 244 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 NMNAT1Q9HAN9 279 aaPredicted RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 EXOSC3Q9NQT5 275 aaKnown RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 ACER3Q9NUN7 267 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 ANKRD10Q9NXR5 420 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 KLRF1Q9NZS2 232 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 ABI3Q9P2A4 366 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 TESQ9UGI8 421 aaKnown RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 OAZ3Q9UMX2 235 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 SAMHD1Q9Y3Z3 626 aaKnown RBP16.08■□□□□ 0.16
UPF3A-206ENST00000480362 CFAP54Q96N23 3096 aa16.08■□□□□ 0.16
UPF3A-206ENST00000480362 C17orf51A8MQB3 221 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 TNFRSF11BO00300 401 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 FMO6PO60774 539 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 GADD45GO95257 159 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 H1F0P07305 194 aaKnown RBP16.07■□□□□ 0.16
UPF3A-206ENST00000480362 ZNF23P17027 643 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 FUT4P22083 530 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 HTR2AP28223 471 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 DNAJA1P31689 397 aaKnown RBP16.07■□□□□ 0.16
UPF3A-206ENST00000480362 RYKP34925 604 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 PTGDSP41222 190 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 CCL11P51671 97 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 ZNF117Q03924 483 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 C17orf67Q0P5P2 114 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 EPS8Q12929 822 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 RAPSNQ13702 412 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 OR1Q1Q15612 314 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 SLC22A10Q63ZE4 541 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 RTL4Q6ZR62 310 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 LINC00696Q6ZRV3 163 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 MISPQ8IVT2 679 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 TMCO5AQ8N6Q1 288 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 PIK3C3Q8NEB9 887 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 OR52J3Q8NH60 311 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 SH3YL1Q96HL8 342 aaPredicted RBP16.07■□□□□ 0.16
UPF3A-206ENST00000480362 EPYCQ99645 322 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 COQ10BQ9H8M1 238 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 GALNT9Q9HCQ5 603 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 SSUH2Q9Y2M2 353 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 LYVE1Q9Y5Y7 322 aa16.07■□□□□ 0.16
UPF3A-206ENST00000480362 DOCK10Q96BY6 2186 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 G3V2T6 193 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 PDLIM1O00151 329 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 HCRTR2O43614 444 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 LINGO3P0C6S8 592 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 CCL3P10147 92 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 FPR1P21462 350 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 IFNA8P32881 189 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 EIF2S3P41091 472 aaKnown RBP16.06■□□□□ 0.16
UPF3A-206ENST00000480362 CYB561P49447 251 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 CCR4P51679 360 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 HMGA2P52926 109 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 SMIM11AP58511 58 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 OC90Q02509 493 aaPredicted RBP16.06■□□□□ 0.16
UPF3A-206ENST00000480362 COLEC12Q5KU26 742 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 PRAMEF20Q5VT98 475 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 AGAP7PQ5VUJ5 663 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 TMEM81Q6P7N7 255 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 CCDC81Q6ZN84 652 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 SPACA3Q8IXA5 215 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 CYP4Z2PQ8N1L4 340 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 SVOPLQ8N434 492 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 OR4C15Q8NGM1 316 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 ADAMTS16Q8TE57 1224 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 PAQR8Q8TEZ7 354 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 GATA6Q92908 595 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 SGCZQ96LD1 299 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 DHRS1Q96LJ7 313 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 AGAP4Q96P64 663 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 BARD1Q99728 777 aaKnown RBP16.06■□□□□ 0.16
UPF3A-206ENST00000480362 C9orf16Q9BUW7 83 aa16.06■□□□□ 0.16
UPF3A-206ENST00000480362 OSBPL11Q9BXB4 747 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms