RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	LRRC34	Q8IZ02	419 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	ANKRD42	Q8N9B4	389 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	TESC	Q96BS2	214 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	DACH2	Q96NX9	599 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	SDF2	Q99470	211 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	TMEM185B	Q9H7F4	350 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	ST6GALNAC2	Q9UJ37	374 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	KCNE5	Q9UJ90	142 aa		13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	NUP214	P35658	2090 aa	Predicted RBP	13.49	□□□□□ -0.25
CCNL1-222	ENST00000479596	CENPVL1	A0A0U1RR11	272 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	RNF103-CHMP3	A0A140T963	221 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596		A0A1W2PPR1	153 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	TMEM120B	A0PK00	339 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	SH3D21	A4FU49	640 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	SDHD	O14521	159 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	EFNA2	O43921	213 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	SNN	O75324	88 aa	Predicted RBP	13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	C1QC	P02747	245 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	NID1	P14543	1247 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	SHC1	P29353	583 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	EIF1AX	P47813	144 aa	Known RBP	13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	PCYT1A	P49585	367 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	ART1	P52961	327 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	ATP12A	P54707	1039 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	RPS3A	P61247	264 aa	Known RBP	13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	RAC1	P63000	192 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	FAM27E3	Q08E93	113 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	FOXF1	Q12946	379 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	OGFOD2	Q6N063	350 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	OLIG3	Q7RTU3	272 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	C6orf120	Q7Z4R8	191 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	CROCCP2	Q86T23	111 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	ANKRD46	Q86W74	232 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	WDR75	Q8IWA0	830 aa	Known RBP	13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	CHDH	Q8NE62	594 aa	Predicted RBP	13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR10D3	Q8NH80	312 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	PHOSPHO1	Q8TCT1	267 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	NINJ1	Q92982	152 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	TEX37	Q96LM6	180 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	PAIP2	Q9BPZ3	127 aa	Known RBP	13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	DPY30	Q9C005	99 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	HOXD1	Q9GZZ0	328 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	CARD8	Q9Y2G2	431 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	TESMIN	Q9Y4I5	508 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596	MPDZ	O75970	2070 aa		13.48	□□□□□ -0.25
CCNL1-222	ENST00000479596		A0A0J9YW62	118 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	TNFSF11	O14788	317 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	CXCL13	O43927	109 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	FCMR	O60667	390 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	SOX30	O94993	753 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	HRG	P04196	525 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	CD8B	P10966	210 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	FCGR2A	P12318	317 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	LBP	P18428	481 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	MATN1	P21941	496 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	CASP9	P55211	416 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	TOMM34	Q15785	309 aa	Predicted RBP	13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	SGCB	Q16585	318 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	SPANXN4	Q5MJ08	99 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	BHLHB9	Q6PI77	547 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	FAM214B	Q7L5A3	538 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	KIRREL3	Q8IZU9	778 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	ZNF527	Q8NB42	609 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR4A15	Q8NGL6	344 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	OR2V1	Q8NHB1	315 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	MIPOL1	Q8TD10	442 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	GPR119	Q8TDV5	335 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	SLC35G5	Q96KT7	338 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	CXXC4	Q9H2H0	198 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	PLEKHF2	Q9H8W4	249 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	CCM2L	Q9NUG4	571 aa	Predicted RBP	13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	PLEKHA6	Q9Y2H5	1048 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	DTNA	Q9Y4J8	743 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	ABCA4	P78363	2273 aa		13.47	□□□□□ -0.25
CCNL1-222	ENST00000479596	MTOR	P42345	2549 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	ZFHX3	Q15911	3703 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	PRSS51	A0A1B0GVH4	220 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	SIAH2	O43255	324 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	SS18L1	O75177	396 aa	Predicted RBP	13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	GOSR1	O95249	250 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	NTN1	O95631	604 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	IL12A	P29459	219 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	CD79B	P40259	229 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	P2RX1	P51575	399 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	SLC18A1	P54219	525 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	SUMO3	P55854	103 aa	Predicted RBP	13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	FUT5	Q11128	374 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	CASP8	Q14790	479 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	PDZK1	Q5T2W1	519 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	HHAT	Q5VTY9	493 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	SAXO2	Q658L1	398 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	HEPHL1	Q6MZM0	1159 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	PAMR1	Q6UXH9	720 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	ESPNL	Q6ZVH7	1005 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	FBXO27	Q8NI29	283 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	MGARP	Q8TDB4	240 aa		13.46	□□□□□ -0.25
CCNL1-222	ENST00000479596	TLCD1	Q96CP7	247 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms