RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 LOC100131303A0A0U1RQF7 123 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 A0A1B0GUL7 405 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 TUBAL3A6NHL2 446 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 TMEM110-MUSTN1A8MSY1 372 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 H3BMQ9 156 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 EMC8O43402 210 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 MBD3O95983 291 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 AK1P00568 194 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 CHRNA1P02708 482 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 CSF2P04141 144 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 SEMG1P04279 462 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 CALCBP10092 127 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 IGLL1P15814 213 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 SERPINA2P20848 420 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 NTSP30990 170 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 EPHX2P34913 555 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 RBMXP38159 391 aaKnown RBP2.3□□□□□ -2.04
TARDBP-208ENST00000477447 BPIFB3P59826 476 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 MRPS11P82912 194 aaKnown RBP2.3□□□□□ -2.04
TARDBP-208ENST00000477447 ZNF45Q02386 682 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 LAGE3Q14657 143 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 INAQ16352 499 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 AANATQ16613 207 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 ASPHD2Q6ICH7 369 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 CBLN3Q6UW01 205 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 TMEM110Q86TL2 294 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 NANPQ8TBE9 248 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 CYYR1Q96J86 154 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 SMIM14Q96QK8 99 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 OR5B2Q96R09 309 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 NICN1Q9BSH3 213 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 DUSP16Q9BY84 665 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 MRPL13Q9BYD1 178 aaKnown RBP2.3□□□□□ -2.04
TARDBP-208ENST00000477447 ZNF221Q9UK13 617 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 SPACA6W5XKT8 324 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 ATP8B3O60423 1300 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 CUX2O14529 1486 aa2.3□□□□□ -2.04
TARDBP-208ENST00000477447 PRRC2AP48634 2157 aaKnown RBP2.29□□□□□ -2.04
TARDBP-208ENST00000477447 IGHV7-81A0A0B4J1V7 117 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 PPIAL4CA0A0B4J2A2 164 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 ESYT2A0FGR8 921 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 RGSL1A5PLK6 1076 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 B4DXG7 233 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 CLDN5O00501 218 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 DIRAS3O95661 229 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 F10P00742 488 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 OPN1LWP04000 364 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 PPIAL4GP0DN37 164 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 CLUP10909 449 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 NCF1P14598 390 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-208ENST00000477447 CAV2P51636 162 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 EFNA3P52797 238 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 EGFEM1PQ0D2K5 195 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 ELAVL3Q14576 367 aaKnown RBP2.29□□□□□ -2.04
TARDBP-208ENST00000477447 HERPUD1Q15011 391 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 NDUFA9Q16795 377 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 LRRC36Q1X8D7 754 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 CCDC92Q53HC0 331 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-208ENST00000477447 TMEM41BQ5BJD5 291 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 SULT1C3Q6IMI6 304 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 APTXQ7Z2E3 356 aaKnown RBP2.29□□□□□ -2.04
TARDBP-208ENST00000477447 PPP1R27Q86WC6 154 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 ERI1Q8IV48 349 aaKnown RBP2.29□□□□□ -2.04
TARDBP-208ENST00000477447 ZNF100Q8IYN0 542 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 CENPLQ8N0S6 344 aaPredicted RBP2.29□□□□□ -2.04
TARDBP-208ENST00000477447 ALLCQ8N6M5 410 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 ZNF414Q96IQ9 312 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 MS4A14Q96JA4 679 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 PLEKHF1Q96S99 279 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 CYP2S1Q96SQ9 504 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 ZNF416Q9BWM5 594 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 DPH5Q9H2P9 285 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 CALHM2Q9HA72 323 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 TAS2R3Q9NYW6 316 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 UBQLN1Q9UMX0 589 aaKnown RBP2.29□□□□□ -2.04
TARDBP-208ENST00000477447 SMC3Q9UQE7 1217 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 WDR45Q9Y484 360 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 OARD1Q9Y530 152 aa2.29□□□□□ -2.04
TARDBP-208ENST00000477447 IGHV1OR15-1A0A075B7D0 117 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.28□□□□□ -2.04
TARDBP-208ENST00000477447 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.28□□□□□ -2.04
TARDBP-208ENST00000477447 ZNF705EA8MWA4 302 aaPredicted RBP2.28□□□□□ -2.04
TARDBP-208ENST00000477447 CTAGE5O15320 804 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 CLDN3O15551 220 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 B3GALNT1O75752 331 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 MMP23AO75900 390 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 IGLV1-47P01700 117 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 IGF1P05019 195 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 FUT3P21217 361 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 CALB2P22676 271 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 PSMA2P25787 234 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 CD86P42081 329 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 KIR2DS2P43631 304 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 WNT4P56705 351 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 GNB2P62879 340 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 HTD2P86397 168 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 EWSR1Q01844 656 aaKnown RBP eCLIP2.28□□□□□ -2.04
TARDBP-208ENST00000477447 CUL1Q13616 776 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 CCDC57Q2TAC2 916 aa2.28□□□□□ -2.04
TARDBP-208ENST00000477447 TIGITQ495A1 244 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms