RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 DTNAQ9Y4J8 743 aa11.24□□□□□ -0.61
APTX-220ENST00000476858 PCNX1Q96RV3 2341 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 SERINC4A6NH21 518 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 SCDO00767 359 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 STX11O75558 287 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 ANP32DO95626 131 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 TFPTP0C1Z6 253 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 ZNF708P17019 499 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 CRATP43155 626 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 AGFG1P52594 562 aaKnown RBP11.23□□□□□ -0.61
APTX-220ENST00000476858 ARFIP2P53365 341 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 FOXF1Q12946 379 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 SKP2Q13309 424 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 RGNQ15493 299 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 PLPPR5Q32ZL2 321 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 POMZP3Q6PJE2 187 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 B3GNT6Q6ZMB0 384 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 COMTD1Q86VU5 262 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 UBQLNLQ8IYU4 475 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 C9orf106Q8NAJ2 232 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 PHF10Q8WUB8 498 aaKnown RBP11.23□□□□□ -0.61
APTX-220ENST00000476858 SMPDL3BQ92485 455 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 CNOT9Q92600 299 aaKnown RBP11.23□□□□□ -0.61
APTX-220ENST00000476858 ZNF845Q96IR2 970 aaPredicted RBP11.23□□□□□ -0.61
APTX-220ENST00000476858 RNF145Q96MT1 663 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 TRIB1Q96RU8 372 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 SLC39A3Q9BRY0 314 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 NMUR2Q9GZQ4 415 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 TMEM185BQ9H7F4 350 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 RMND5AQ9H871 391 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 SAR1AQ9NR31 198 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 SDHAF3Q9NRP4 125 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 ARMCX1Q9P291 453 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 SUCOQ9UBS9 1254 aaKnown RBP11.23□□□□□ -0.61
APTX-220ENST00000476858 MRPS18CQ9Y3D5 142 aaKnown RBP11.23□□□□□ -0.61
APTX-220ENST00000476858 WDR45Q9Y484 360 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 CHST2Q9Y4C5 530 aa11.23□□□□□ -0.61
APTX-220ENST00000476858 NBPF19A0A087WUL8 3843 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 A0A1W2PP18 115 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 DUXAA6NLW8 204 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 FAM90A27PA6NNH2 459 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 H3BML4 177 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 CLIC1O00299 241 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 AP3D1O14617 1153 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 SEC14L5O43304 696 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 CYP7B1O75881 506 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 TGM6O95932 706 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 BCHEP06276 602 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 HPGDP15428 266 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 DRD4P21917 467 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 LCN1P31025 176 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 PGM1P36871 562 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 CLK3P49761 638 aaKnown RBP11.22□□□□□ -0.61
APTX-220ENST00000476858 PER3P56645 1201 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 FOXF2Q12947 444 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 KLF10Q13118 480 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 CAPRIN1Q14444 709 aaKnown RBP11.22□□□□□ -0.61
APTX-220ENST00000476858 AP1ARQ63HQ0 302 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 MAMDC2Q7Z304 686 aaPredicted RBP11.22□□□□□ -0.61
APTX-220ENST00000476858 GGNQ86UU5 652 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 VRK2Q86Y07 508 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 ZNF619Q8N2I2 560 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 ZNF808Q8N4W9 903 aaPredicted RBP11.22□□□□□ -0.61
APTX-220ENST00000476858 TRIML2Q8N7C3 387 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 GPR119Q8TDV5 335 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 SLC38A5Q8WUX1 472 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 PHF3Q92576 2039 aaKnown RBP11.22□□□□□ -0.61
APTX-220ENST00000476858 CPPED1Q9BRF8 314 aaPredicted RBP11.22□□□□□ -0.61
APTX-220ENST00000476858 EXD2Q9NVH0 621 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 RLIMQ9NVW2 624 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 GMPR2Q9P2T1 348 aaKnown RBP11.22□□□□□ -0.61
APTX-220ENST00000476858 USP22Q9UPT9 525 aa11.22□□□□□ -0.61
APTX-220ENST00000476858 DSPPQ9NZW4 1301 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 FIGNL2A6NMB9 653 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 CLCA1A8K7I4 914 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 WDR1O75083 606 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 ACTL6AO96019 429 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 UBTFL6P0CB48 400 aaPredicted RBP11.21□□□□□ -0.61
APTX-220ENST00000476858 TROVE2P10155 538 aaKnown RBP eCLIP11.21□□□□□ -0.61
APTX-220ENST00000476858 NR2F1P10589 423 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 UBL4AP11441 157 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 PEPDP12955 493 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 CPN1P15169 458 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 KLK2P20151 261 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 RPS4Y1P22090 263 aaKnown RBP11.21□□□□□ -0.61
APTX-220ENST00000476858 CHMP24386 653 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 CCR4P51679 360 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 ZNF136P52737 540 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 MTPNP58546 118 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 DSTNP60981 165 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 SNTB1Q13884 538 aaKnown RBP11.21□□□□□ -0.61
APTX-220ENST00000476858 FGFBP1Q14512 234 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 ADRM1Q16186 407 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 CTU2Q2VPK5 515 aaKnown RBP11.21□□□□□ -0.61
APTX-220ENST00000476858 ATAD3BQ5T9A4 648 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 ADGRE4PQ86SQ3 457 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 TMCO5AQ8N6Q1 288 aa11.21□□□□□ -0.61
APTX-220ENST00000476858 POU5F2Q8N7G0 328 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms