RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 DDCP20711 480 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 HNF1AP20823 631 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 ENPP1P22413 925 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 IGHV1-2P23083 117 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 EDNRAP25101 427 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 CFPP27918 469 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 TIA1P31483 386 aaKnown RBP eCLIP10.03□□□□□ -0.8
BRCA1-213ENST00000476777 MAGEA4P43358 317 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 OR3A2P47893 321 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 SERPINB8P50452 374 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 EFNA4P52798 201 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 SPOCK1Q08629 439 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 ACSM2AQ08AH3 577 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 SLC29A2Q14542 456 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 GLE1Q53GS7 698 aaKnown RBP10.03□□□□□ -0.8
BRCA1-213ENST00000476777 SPIN4Q56A73 249 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 TIMM23BQ5SRD1 257 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 ACSM2BQ68CK6 577 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 GALNT18Q6P9A2 607 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 B3GLCTQ6Y288 498 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 SSX8Q7RTT4 187 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 P2RY8Q86VZ1 359 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 MEX3DQ86XN8 651 aaKnown RBP10.03□□□□□ -0.8
BRCA1-213ENST00000476777 FBXL14Q8N1E6 418 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 PIK3R3Q92569 461 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 SH3YL1Q96HL8 342 aaPredicted RBP10.03□□□□□ -0.8
BRCA1-213ENST00000476777 PRR14Q9BWN1 585 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 EBPLQ9BY08 206 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 GLIPR2Q9H4G4 154 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 CXorf36Q9H7Y0 433 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 BCO1Q9HAY6 547 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 C3orf14Q9HBI5 128 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 EML4Q9HC35 981 aaKnown RBP10.03□□□□□ -0.8
BRCA1-213ENST00000476777 TAS2R7Q9NYW3 318 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 PRSS50Q9UI38 385 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 TRRAPQ9Y4A5 3859 aa10.03□□□□□ -0.8
BRCA1-213ENST00000476777 TTC36A6NLP5 189 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 KCNAB3O43448 404 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 ULK1O75385 1050 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 LY6HO94772 140 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 KRT6AP02538 564 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 KRT6BP04259 564 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 GGT1P19440 569 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 COX5AP20674 150 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 ELK4P28324 431 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 MAP3K8P41279 467 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 EIF1P41567 113 aaKnown RBP10.02□□□□□ -0.81
BRCA1-213ENST00000476777 KRT6CP48668 564 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 FABP6P51161 128 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 GUCY2DQ02846 1103 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 FOXF1Q12946 379 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 GGTLC2Q14390 218 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 TMEM176BQ3YBM2 270 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-213ENST00000476777 SLC22A25Q6T423 547 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 TMEM108Q6UXF1 575 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 ZAR1Q86SH2 424 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 SLC43A2Q8N370 569 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 RFLNBQ8N5W9 214 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 OR2W6PQ8NHA6 318 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 GPR151Q8TDV0 419 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 HOXB13Q92826 284 aaPredicted RBP10.02□□□□□ -0.81
BRCA1-213ENST00000476777 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
BRCA1-213ENST00000476777 AMDHD1Q96NU7 426 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 PSD2Q9BQI7 771 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 C1QTNF3Q9BXJ4 246 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 COQ10BQ9H8M1 238 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 POU2F3Q9UKI9 436 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 GRID1Q9ULK0 1009 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 NFU1Q9UMS0 254 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 MGAT4BQ9UQ53 548 aa10.02□□□□□ -0.81
BRCA1-213ENST00000476777 IGHV3-15A0A0B4J1V0 119 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 FAM187AA6NFU0 413 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 OR5H1A6NKK0 313 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 GJE1A6NN92 205 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF195O14628 629 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 RGS14O43566 566 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 TCF21O43680 179 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 KIAA0513O60268 411 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 NKX2-2O95096 273 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 ANXA4P09525 319 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-213ENST00000476777 SBK3P0C264 359 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 DHRS4L1P0CG22 281 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 CD40P25942 277 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 HSD17B3P37058 310 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 MAGEA12P43365 314 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 GSTM5P46439 218 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 PRIM2P49643 509 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 HTR6P50406 440 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 PLTPP55058 493 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 CLCQ05315 142 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 C2orf80Q0P641 193 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 TRADDQ15628 312 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 CD226Q15762 336 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 UAP1Q16222 522 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF544Q6NX49 715 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 C12orf54Q6X4T0 127 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 TMEM151AQ8N4L1 468 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 ZNF433Q8N7K0 673 aaPredicted RBP10.01□□□□□ -0.81
BRCA1-213ENST00000476777 B4GALNT2Q8NHY0 566 aa10.01□□□□□ -0.81
BRCA1-213ENST00000476777 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms