RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 ARL13AQ5H913 290 aaPredicted RBP12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 CCNYL2Q5T2Q4 361 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 MROH9Q5TGP6 573 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 SLC44A2Q8IWA5 706 aaPredicted RBP12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 SLC43A2Q8N370 569 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 MREGQ8N565 214 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 TEX29Q8N6K0 151 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 WDR20Q8TBZ3 569 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 MRPL24Q96A35 216 aaKnown RBP12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 KLHL29Q96CT2 875 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 PAFAH2Q99487 392 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 RTN4RQ9BZR6 473 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 SAP130Q9H0E3 1048 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 FKRPQ9H9S5 495 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 VDAC3Q9Y277 283 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 ARFGEF3Q5TH69 2177 aa12.73□□□□□ -0.37
CSNK2B-207ENST00000475875 LRP5LA4QPB2 252 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 SNUPNO95149 360 aaKnown RBP12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 SHBGP04278 402 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 SNRPAP09012 282 aaKnown RBP12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 STMN1P16949 149 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 PSMA4P25789 261 aaKnown RBP12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 MAPK12P53778 367 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 PHC1P78364 1004 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 DUSP2Q05923 314 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 CPTPQ5TA50 214 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 RAPH1Q70E73 1250 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 TRABD2AQ86V40 505 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 SPATA6LQ8N4H0 392 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 OR4N2Q8NGD1 307 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 STAG3L4Q8TBR4 150 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 CNRIP1Q96F85 164 aaPredicted RBP12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 ROPN1BQ9BZX4 212 aaPredicted RBP12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 ROPN1Q9HAT0 212 aaPredicted RBP12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 BCO1Q9HAY6 547 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 TAS2R9Q9NYW1 312 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 ZNF180Q9UJW8 692 aa12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 MRTO4Q9UKD2 239 aaKnown RBP12.72□□□□□ -0.37
CSNK2B-207ENST00000475875 SMIM23A6NLE4 172 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 PLOD3O60568 738 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 LILRA1O75019 489 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 IGHV1-2P23083 117 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 CRABP2P29373 138 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 TYK2P29597 1187 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 PSMD4P55036 377 aaKnown RBP12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 SNRPD2P62316 118 aaKnown RBP12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 PRR5P85299 388 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 CPSF6Q16630 551 aaKnown RBP eCLIP12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 DECR1Q16698 335 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 MST1LQ2TV78 715 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 BEND6Q5SZJ8 279 aaPredicted RBP12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 FCRLAQ7L513 359 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 MARCH3Q86UD3 253 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 GLCCI1Q86VQ1 547 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 SAMD14Q8IZD0 417 aaPredicted RBP12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 NUP43Q8NFH3 380 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 ACTRT2Q8TDY3 377 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 DCAKDQ8WVC6 231 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 GPR22Q99680 433 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 MCMBPQ9BTE3 642 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 FAIM2Q9BWQ8 316 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 TBL1XR1Q9BZK7 514 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 KLHL9Q9P2J3 617 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 TBK1Q9UHD2 729 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 FBXO9Q9UK97 447 aaPredicted RBP12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 ACOT9Q9Y305 439 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 SPEF1Q9Y4P9 236 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 ANGPTL3Q9Y5C1 460 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 SLC25A15Q9Y619 301 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 ATP23Q9Y6H3 246 aa12.71□□□□□ -0.37
CSNK2B-207ENST00000475875 PCNX3Q9H6A9 2034 aa12.71□□□□□ -0.38
CSNK2B-207ENST00000475875 B4DSR2 109 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 NDUFB5O43674 189 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 STAMBPO95630 424 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 ANGPTL1O95841 491 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 LTA4HP09960 611 aaKnown RBP12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 NUDT17P0C025 328 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 IL2RGP31785 369 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 ZNF83P51522 516 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 PSG6Q00889 435 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 CSTF3Q12996 717 aaKnown RBP12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 C1QTNF12Q5T7M4 302 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 SHQ1Q6PI26 577 aaKnown RBP12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 CROCCP2Q86T23 111 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 TEX9Q8N6V9 391 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 ZNF433Q8N7K0 673 aaPredicted RBP12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 L3MBTL4Q8NA19 623 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 EXT2Q93063 718 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 UBXN10Q96LJ8 280 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 RNF145Q96MT1 663 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 CAB39LQ9H9S4 337 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 FLRT3Q9NZU0 649 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 PSMC3IPQ9P2W1 217 aaPredicted RBP12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 PRSS50Q9UI38 385 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 USP22Q9UPT9 525 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 WBP11Q9Y2W2 641 aaKnown RBP12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 PCDHB14Q9Y5E9 798 aa12.7□□□□□ -0.38
CSNK2B-207ENST00000475875 NPIPA5A0A0B4J1W7 369 aa12.69□□□□□ -0.38
CSNK2B-207ENST00000475875 A0A1W2PRB8 838 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms