RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PAQR9Q6ZVX9 377 aa4.36□□□□□ -1.71
SMC5-203ENST00000475540 ERASQ7Z444 233 aa4.36□□□□□ -1.71
SMC5-203ENST00000475540 MCOLN2Q8IZK6 566 aa4.36□□□□□ -1.71
SMC5-203ENST00000475540 OTUD6BQ8N6M0 293 aa4.36□□□□□ -1.71
SMC5-203ENST00000475540 ZNF397Q8NF99 534 aaPredicted RBP4.36□□□□□ -1.71
SMC5-203ENST00000475540 FBXO32Q969P5 355 aa4.36□□□□□ -1.71
SMC5-203ENST00000475540 WRAP53Q9BUR4 548 aaKnown RBP4.36□□□□□ -1.71
SMC5-203ENST00000475540 EXOSC3Q9NQT5 275 aaKnown RBP4.36□□□□□ -1.71
SMC5-203ENST00000475540 MIOXQ9UGB7 285 aa4.36□□□□□ -1.71
SMC5-203ENST00000475540 SLC2A6Q9UGQ3 507 aa4.36□□□□□ -1.71
SMC5-203ENST00000475540 ZNF490Q9ULM2 529 aaPredicted RBP4.36□□□□□ -1.71
SMC5-203ENST00000475540 BARX2Q9UMQ3 279 aaPredicted RBP4.36□□□□□ -1.71
SMC5-203ENST00000475540 ZMYM6O95789 1325 aa4.36□□□□□ -1.71
SMC5-203ENST00000475540 WI2-2373I1.2A0A1W2PRP0 233 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 LRIT2A6NDA9 550 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 E9PBE3 544 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.35□□□□□ -1.71
SMC5-203ENST00000475540 PRRG1O14668 218 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 BUB1O43683 1085 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 SDC3O75056 442 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 ERLIN1O75477 346 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 NOL4O94818 638 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 ACTL6AO96019 429 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 PSMB1P20618 241 aaKnown RBP4.35□□□□□ -1.71
SMC5-203ENST00000475540 ACVR1BP36896 505 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 PTGFRP43088 359 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 AIF1P55008 147 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 ACTR3P61158 418 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 NUCB2P80303 420 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 PUDPQ08623 228 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 IL18R1Q13478 541 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 CAMK4Q16566 473 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 TPGS2Q68CL5 300 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 NIPAL3Q6P499 406 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 GPR65Q8IYL9 337 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 BBS5Q8N3I7 341 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 BHLHE23Q8NDY6 225 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 C16orf74Q96GX8 76 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 C4orf36Q96KX1 117 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 VPS35Q96QK1 796 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 DPH7Q9BTV6 452 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 C19orf24Q9BVV8 132 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 TBC1D10AQ9BXI6 508 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 NFKBIZQ9BYH8 718 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 CRNKL1Q9BZJ0 848 aaKnown RBP4.35□□□□□ -1.71
SMC5-203ENST00000475540 ZNF702PQ9H963 129 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 STARD5Q9NSY2 213 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 RDH8Q9NYR8 311 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 CLEC4AQ9UMR7 237 aa4.35□□□□□ -1.71
SMC5-203ENST00000475540 MBLAC1A4D2B0 266 aaPredicted RBP4.34□□□□□ -1.71
SMC5-203ENST00000475540 LRRIQ4A6NIV6 560 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 E9PMD0 336 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 SGK494L7N484 410 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 B4GALT2O60909 372 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 CIB2O75838 187 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 IL1BP01584 269 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 CSF2P04141 144 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 CPN1P15169 458 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 ZP3P21754 424 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 IGHV1-2P23083 117 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 POU3F4P49335 361 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 WNT4P56705 351 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 CBX1P83916 185 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 TRIP10Q15642 601 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 DCAF4L1Q3SXM0 396 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 CFAP221Q4G0U5 840 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 LIPKQ5VXJ0 399 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 METAP1DQ6UB28 335 aaPredicted RBP4.34□□□□□ -1.71
SMC5-203ENST00000475540 CBLN3Q6UW01 205 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 NANOGNBQ7Z5D8 188 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 SLC22A9Q8IVM8 553 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 CENPSQ8N2Z9 138 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 FRAT1Q92837 279 aaPredicted RBP4.34□□□□□ -1.71
SMC5-203ENST00000475540 MCHR2Q969V1 340 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 C11orf24Q96F05 449 aaPredicted RBP4.34□□□□□ -1.71
SMC5-203ENST00000475540 PKIBQ9C010 78 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 NMUR2Q9GZQ4 415 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 AIPL1Q9NZN9 384 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 P2RX2Q9UBL9 471 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 RPS6KB2Q9UBS0 482 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 PDE10AQ9Y233 779 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 MRPS33Q9Y291 106 aaKnown RBP4.34□□□□□ -1.71
SMC5-203ENST00000475540 FKBP7Q9Y680 259 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 TTC21BQ7Z4L5 1316 aa4.34□□□□□ -1.71
SMC5-203ENST00000475540 A0A0U1RQS6 177 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 CCDC166P0CW27 439 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 CASQ1P31415 396 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 DLSTP36957 453 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 CEBPDP49716 269 aaPredicted RBP4.33□□□□□ -1.72
SMC5-203ENST00000475540 ACADVLP49748 655 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 SH3BGRP55822 239 aaPredicted RBP4.33□□□□□ -1.72
SMC5-203ENST00000475540 RIPPLY3P57055 190 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 IL9RQ01113 521 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 ASPHD2Q6ICH7 369 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 BLOC1S2Q6QNY1 142 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 CENPUQ71F23 418 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 MOB1BQ7L9L4 216 aa4.33□□□□□ -1.72
SMC5-203ENST00000475540 EFL1Q7Z2Z2 1120 aaKnown RBP4.33□□□□□ -1.72
SMC5-203ENST00000475540 GPBP1Q86WP2 473 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms