RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 BCHEP06276 602 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 NR2F1P10589 423 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ENDOUP21128 410 aaKnown RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 PPIBP23284 216 aaKnown RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 KRT20P35900 424 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 MAGEA5P43359 124 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 GSK3BP49841 420 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 SLC7A2P52569 658 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 B3GALT5-AS1P59052 145 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 PSME3P61289 254 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 PPIAP62937 165 aaKnown RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 KCNJ2P63252 427 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 CBX1P83916 185 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 SLC25A3Q00325 362 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 CDK6Q00534 326 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF117Q03924 483 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 DMTNQ08495 405 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 SKP2Q13309 424 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 INAQ16352 499 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 GPAT3Q53EU6 434 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 TBCELQ5QJ74 424 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ATAD3BQ5T9A4 648 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 RINLQ6ZS11 566 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 TRPM8Q7Z2W7 1104 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 SERPINA11Q86U17 422 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 PACS2Q86VP3 889 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF619Q8N2I2 560 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 CLIP4Q8N3C7 705 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 GATSQ8NAP1 163 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 PCYOX1LQ8NBM8 494 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 RBM15BQ8NDT2 890 aaKnown RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 OR2M3Q8NG83 312 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 SPATA3Q8NHX4 192 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 NFKBIDQ8NI38 313 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 NR4A3Q92570 626 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 CNOT9Q92600 299 aaKnown RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 NSL1Q96IY1 281 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 G6PC3Q9BUM1 346 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 THUMPD3Q9BV44 507 aaKnown RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 TMUB1Q9BVT8 246 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 MTHFD2LQ9H903 347 aaPredicted RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 POLE3Q9NRF9 147 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 EXD2Q9NVH0 621 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 RLIMQ9NVW2 624 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 KLRF1Q9NZS2 232 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 MED11Q9P086 117 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM181Q9P2C4 612 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 P2RX2Q9UBL9 471 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 MRTO4Q9UKD2 239 aaKnown RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 PACSIN3Q9UKS6 424 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ICAM5Q9UMF0 924 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 C15orf41Q9Y2V0 281 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 L3MBTL1Q9Y468 752 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 WDR45Q9Y484 360 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 DTNAQ9Y4J8 743 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 PCDHGB3Q9Y5G1 929 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 NCOA6Q14686 2063 aaPredicted RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ARHGAP21Q5T5U3 1957 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ABCA4P78363 2273 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 A0A1W2PQD3 144 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 PRORSD1PA6NEY8 169 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 SERINC4A6NH21 518 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 EVPLLA8MZ36 301 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 B2RBV5 119 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 NPIPA5E9PKD4 350 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 IGHG3P01860 377 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 PRG2P13727 222 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF24P17028 368 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ATP6V1C1P21283 382 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 AQP1P29972 269 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 PCGF2P35227 344 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 PGM1P36871 562 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ADH7P40394 386 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 PSMD4P55036 377 aaKnown RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 EEF1A1P68104 462 aaKnown RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 HSF1Q00613 529 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 LIPEQ05469 1076 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ART3Q13508 389 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 CEACAM7Q14002 265 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 SCARB2Q14108 478 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 FGFBP1Q14512 234 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 TOMM34Q15785 309 aaPredicted RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 FXNQ16595 210 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 CYP51A1Q16850 503 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF630Q2M218 657 aaPredicted RBP6.34□□□□□ -1.39
LIMD1-204ENST00000474665 VMACQ2NL98 169 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM44Q2T9K0 475 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 GLIPR1L2Q4G1C9 344 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 EIPR1Q53HC9 387 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 PRAMEF8Q5VWM4 474 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 PRAMEF7Q5VXH5 474 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 REEP3Q6NUK4 255 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ARSKQ6UWY0 536 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF836Q6ZNA1 936 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 CDH24Q86UP0 819 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 VRK2Q86Y07 508 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 PLCZ1Q86YW0 608 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 SPPL2CQ8IUH8 684 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 C11orf65Q8NCR3 313 aa6.34□□□□□ -1.39
LIMD1-204ENST00000474665 FAM156AQ8NDB6 213 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms