RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SDC3O75056 442 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ADAM11O75078 769 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 GPX5O75715 221 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 SULT1C4O75897 302 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 IGHA1P01876 353 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CKMT1AP12532 417 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 BMP4P12644 408 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 GLB1P16278 677 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CPEP16870 476 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 HTR1FP30939 366 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 HOXA6P31267 233 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CSF2RBP32927 897 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ADH7P40394 386 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ETV5P41161 510 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 MTNR1AP48039 350 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CXCL12P48061 93 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CSNK1EP49674 416 aaKnown RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 ETV1P50549 477 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 AFF3P51826 1226 aaKnown RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 CDH11P55287 796 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 WNT4P56705 351 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 BNC1Q01954 994 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ACSM1Q08AH1 577 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 SRSF5Q13243 272 aaKnown RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 TMED1Q13445 227 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 C1DQ13901 141 aaKnown RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 ERV3-1Q14264 604 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ZNF267Q14586 743 aaPredicted RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 SHBQ15464 509 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 WDR45BQ5MNZ6 344 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 FNDC7Q5VTL7 733 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 YOD1Q5VVQ6 348 aaPredicted RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 SLC30A6Q6NXT4 461 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 TUBA3EQ6PEY2 450 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 PAQR6Q6TCH4 344 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ZNF550Q7Z398 422 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 SLC35F3Q8IY50 421 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 LNX2Q8N448 690 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 AMER2Q8N7J2 671 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 RCBTB1Q8NDN9 531 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 OR4N2Q8NGD1 307 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 PFN4Q8NHR9 129 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 C16orf52Q8NHV5 167 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 MCFD2Q8NI22 146 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CHPT1Q8WUD6 406 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 RFKQ969G6 155 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 RNFT2Q96EX2 444 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 SAMD8Q96LT4 415 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CCNL2Q96S94 520 aaPredicted RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 CDX2Q99626 313 aaPredicted RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 ZNF649Q9BS31 505 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CDADC1Q9BWV3 514 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 TEX12Q9BXU0 123 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 DPH1Q9BZG8 443 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 TRIM2Q9C040 744 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 OR10A5Q9H207 317 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 UBQLN3Q9H347 655 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 TMEM27Q9HBJ8 222 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 MEPEQ9NQ76 525 aaPredicted RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 HINT3Q9NQE9 182 aaKnown RBP9.06□□□□□ -0.96
USP39-214ENST00000474572 CUTCQ9NTM9 273 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 C20orf141Q9NUB4 165 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 FAIMQ9NVQ4 179 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 TBCCD1Q9NVR7 557 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 PRODH2Q9UF12 536 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 GMEB2Q9UKD1 530 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 CBLCQ9ULV8 474 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ICAM5Q9UMF0 924 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 ERVK-19Q9WJR5 959 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 MED31Q9Y3C7 131 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 SZT2Q5T011 3432 aa9.06□□□□□ -0.96
USP39-214ENST00000474572 GOLGA4Q13439 2230 aaKnown RBP9.05□□□□□ -0.96
USP39-214ENST00000474572 A0A075B6Q4 140 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 A0A1B0GWA3 101 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 EFCAB7A8K855 629 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 PTP4A3O75365 173 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 RFPL3O75679 317 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 RCBTB2O95199 551 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 IGF2P01344 180 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 LIMS3P0CW19 117 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 LIMS4P0CW20 117 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 HSMCR30P0CW71 290 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 GAAP10253 952 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 IFI30P13284 250 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 MAOAP21397 527 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 CD40LGP29965 261 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 ETV6P41212 452 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 CRYBB2P43320 205 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 OR1D5P58170 312 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 HSD11B2P80365 405 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 SQSTM1Q13501 440 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 TPBGQ13641 420 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 SOWAHCQ53LP3 525 aaPredicted RBP9.05□□□□□ -0.96
USP39-214ENST00000474572 ARMC4Q5T2S8 1044 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 NKAIN2Q5VXU1 208 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 WDR74Q6RFH5 385 aaPredicted RBP9.05□□□□□ -0.96
USP39-214ENST00000474572 KANSL1Q7Z3B3 1105 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 PLXDC1Q8IUK5 500 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 GID4Q8IVV7 300 aa9.05□□□□□ -0.96
USP39-214ENST00000474572 PHC2Q8IXK0 858 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms