RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OR6K3Q8NGY3 331 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 OR2V1Q8NHB1 315 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 ADAMTS15Q8TE58 950 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 CAVIN3Q969G5 261 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 SH3YL1Q96HL8 342 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-203ENST00000472892 MARK4Q96L34 752 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 BHLHE41Q9C0J9 482 aaPredicted RBP13.7□□□□□ -0.22
VTI1A-203ENST00000472892 GLRX2Q9NS18 164 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 MCTS1Q9ULC4 181 aaKnown RBP13.7□□□□□ -0.22
VTI1A-203ENST00000472892 EMC9Q9Y3B6 208 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 KCNE3Q9Y6H6 103 aa13.7□□□□□ -0.22
VTI1A-203ENST00000472892 ACANP16112 2415 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 CXCL13O43927 109 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 DIAPH2O60879 1101 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 SS18L1O75177 396 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-203ENST00000472892 SKAP2O75563 359 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-203ENST00000472892 KRT16P08779 473 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 ZNF117Q03924 483 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 EMX2Q04743 252 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 TP53BP2Q13625 1128 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 ZNF527Q8NB42 609 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 WFDC11Q8NEX6 87 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 SFXN5Q8TD22 340 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 OSTF1Q92882 214 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 MOAP1Q96BY2 351 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 TUBGCP3Q96CW5 907 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 CHMP6Q96FZ7 201 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 ICAM5Q9UMF0 924 aa13.69□□□□□ -0.22
VTI1A-203ENST00000472892 FAF1Q9UNN5 650 aaPredicted RBP13.69□□□□□ -0.22
VTI1A-203ENST00000472892 NPIPB9F8W1W9 429 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 TNFSF11O14788 317 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 EFNA2O43921 213 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 SYNGR4O95473 234 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 PLGP00747 810 aaPredicted RBP13.68□□□□□ -0.22
VTI1A-203ENST00000472892 G6PDP11413 515 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 NID1P14543 1247 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 ATP6V1C1P21283 382 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 ME2P23368 584 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 ADH6P28332 368 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 ATP12AP54707 1039 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 CTBP2P56545 445 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 CLDN8P56748 225 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 MAD2L1Q13257 205 aaPredicted RBP13.68□□□□□ -0.22
VTI1A-203ENST00000472892 SMU1Q2TAY7 513 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 KRTAP21-3Q3LHN1 58 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 SPDYE7PQ495Y7 208 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 DCST2Q5T1A1 773 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 PDSS1Q5T2R2 415 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 HBMQ6B0K9 141 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 CBLN3Q6UW01 205 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 ZNF550Q7Z398 422 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 KRTAP1-3Q8IUG1 177 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 NUDCD3Q8IVD9 361 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 LILRA2Q8N149 483 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 MREGQ8N565 214 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 PHOSPHO1Q8TCT1 267 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 PIK3IP1Q96FE7 263 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 ZIM3Q96PE6 472 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 PIP5K1AQ99755 562 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 DUSP26Q9BV47 211 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 KLHL4Q9C0H6 718 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 ASIC5Q9NY37 505 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 CLEC4AQ9UMR7 237 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 ACTL7BQ9Y614 415 aa13.68□□□□□ -0.22
VTI1A-203ENST00000472892 H3BNH8 94 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 OIP5O43482 229 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 ITM2AO43736 263 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 PPP3CBP16298 524 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 LOXP28300 417 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-203ENST00000472892 ELK4P28324 431 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 P2RX1P51575 399 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 SUMO3P55854 103 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-203ENST00000472892 CARD18P57730 90 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 HBA1P69905 142 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 NKX6-1P78426 367 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-203ENST00000472892 EXOC3L2Q2M3D2 409 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
VTI1A-203ENST00000472892 ANKRD34AQ69YU3 496 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 GTF2IRD2BQ6EKJ0 949 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 PPP4R4Q6NUP7 873 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 BHLHB9Q6PI77 547 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 GTF2IRD2Q86UP8 949 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 GPR119Q8TDV5 335 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 PIGTQ969N2 578 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 ZC3HAV1LQ96H79 300 aaKnown RBP13.67□□□□□ -0.22
VTI1A-203ENST00000472892 POM121Q96HA1 1249 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 KLHL15Q96M94 604 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 OR7D2Q96RA2 312 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 SDF2Q99470 211 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 GSX1Q9H4S2 264 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-203ENST00000472892 TMEM185BQ9H7F4 350 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 ZNF395Q9H8N7 513 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-203ENST00000472892 NOP53Q9NZM5 478 aaKnown RBP13.67□□□□□ -0.22
VTI1A-203ENST00000472892 CARD8Q9Y2G2 431 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 DTNAQ9Y4J8 743 aa13.67□□□□□ -0.22
VTI1A-203ENST00000472892 NPIPA5A0A0B4J1W7 369 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 NPIPA7E9PJI5 369 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 ZNF195O14628 629 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 BIRC5O15392 142 aa13.66□□□□□ -0.22
VTI1A-203ENST00000472892 CFLARO15519 480 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms