RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SLITRK5O94991 958 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 OXSR1O95747 527 aaPredicted RBP16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 DHRS4L1P0CG22 281 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 HSD3B1P14060 373 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 HSD3B2P26439 372 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 NTSP30990 170 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 PAFAH1B1P43034 410 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 MAGEA4P43358 317 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 MANFP55145 182 aaKnown RBP16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 CHRNEQ04844 493 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 CHRNB3Q05901 458 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 SLC29A2Q14542 456 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 TMEM176BQ3YBM2 270 aaPredicted RBP16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 SPIN4Q56A73 249 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 KLHL17Q6TDP4 642 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 SSX8Q7RTT4 187 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 CREG2Q8IUH2 290 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 RFLNBQ8N5W9 214 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 OR4C3Q8NH37 302 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 POC1BQ8TC44 478 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 ZNF775Q96BV0 537 aaPredicted RBP16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 APIPQ96GX9 242 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 GP6Q9HCN6 339 aa16.75■□□□□ 0.27
NCKIPSD-209ENST00000470006 H7C417 338 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 ULK1O75385 1050 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 NUDT14O95848 222 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 ANXA4P09525 319 aaPredicted RBP16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 TIA1P31483 386 aaKnown RBP eCLIP16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 SRP14P37108 136 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 EIF1P41567 113 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 OR3A2P47893 321 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 PDLIM4P50479 330 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 SPOCK1Q08629 439 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 IQCCQ4KMZ1 466 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 GLE1Q53GS7 698 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 BHLHB9Q6PI77 547 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 P2RY8Q86VZ1 359 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 ZNF100Q8IYN0 542 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 OR2L13Q8N349 312 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 SLC43A2Q8N370 569 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 OR52N5Q8NH56 324 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 B4GALNT2Q8NHY0 566 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 ZNF483Q8TF39 744 aaPredicted RBP16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 ELP4Q96EB1 424 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 ERP44Q9BS26 406 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 PIMREGQ9BSJ6 248 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 SHCBP1LQ9BZQ2 653 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 GLIPR2Q9H4G4 154 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 KLHL9Q9P2J3 617 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 ATP23Q9Y6H3 246 aa16.74■□□□□ 0.27
NCKIPSD-209ENST00000470006 HMX2A2RU54 273 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 TTC36A6NLP5 189 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 M0R1B8 84 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 RPS17P08708 135 aaKnown RBP16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 ITGA2P17301 1181 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 DDCP20711 480 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 ENPP1P22413 925 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 IGHV1-2P23083 117 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 PTAFRP25105 342 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 HMOX2P30519 316 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 FOXF1Q12946 379 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 PRSS53Q2L4Q9 553 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 CR1LQ2VPA4 569 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 MEX3DQ86XN8 651 aaKnown RBP16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 FAM110BQ8TC76 370 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 PRR14Q9BWN1 585 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 GRID1Q9ULK0 1009 aa16.73■□□□□ 0.27
NCKIPSD-209ENST00000470006 TENM1Q9UKZ4 2725 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 CIB4A0PJX0 185 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 OR5H1A6NKK0 313 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 SCDO00767 359 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 ZNF195O14628 629 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 RAD51DO75771 328 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 PRKAG1P54619 331 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 PLTPP55058 493 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 RASGEF1BQ0VAM2 473 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 VPS26BQ4G0F5 336 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 SPDYAQ5MJ70 313 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 SZRD1Q7Z422 152 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 UBE2J2Q8N2K1 259 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 FBXO30Q8TB52 745 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 METTL6Q8TCB7 284 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 ACPTQ9BZG2 426 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 ADAM19Q9H013 955 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 CXorf36Q9H7Y0 433 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 ZNF225Q9UK10 706 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 FKBP7Q9Y680 259 aa16.72■□□□□ 0.27
NCKIPSD-209ENST00000470006 MEGF8Q7Z7M0 2845 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 A0A1W2PR80 420 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 CCT8L1PA6NM43 557 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 ZSCAN12O43309 604 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 KCNAB3O43448 404 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 PSMG1O95456 288 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 PRPS2P11908 318 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 CD40P25942 277 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 SLC7A1P30825 629 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 GPC1P35052 558 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 NR4A2P43354 598 aa16.71■□□□□ 0.27
NCKIPSD-209ENST00000470006 PRIM2P49643 509 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms