RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 BTNL2Q9UIR0 455 aa10.09□□□□□ -0.79
COL4A6-205ENST00000468338 FAF1Q9UNN5 650 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-205ENST00000468338 KCNE3Q9Y6H6 103 aa10.09□□□□□ -0.79
COL4A6-205ENST00000468338 MPDZO75970 2070 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 GOLGA8QA0A0J9YX86 632 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 GOLGA8OA6NCC3 632 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 HSPB2A8KAH6 182 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 GOLGA8NF8WBI6 632 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 CFLARO15519 480 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 GUSBP08236 651 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 KITP10721 976 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 PRF1P14222 555 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 GCKP35557 465 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 STARP49675 285 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 CLDN15P56746 228 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 HSPB2Q16082 182 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 FAM174BQ3ZCQ3 159 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 SLC9B1Q4ZJI4 515 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 KLHL26Q53HC5 615 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 CCNJQ5T5M9 372 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 AAGABQ6PD74 315 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 C20orf204Q6ZNR8 217 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 GALNT10Q86SR1 603 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 MISPQ8IVT2 679 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 GLB1L3Q8NCI6 653 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-205ENST00000468338 NAXEQ8NCW5 288 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 CHDHQ8NE62 594 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-205ENST00000468338 VPS37AQ8NEZ2 397 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 OR10Q1Q8NGQ4 319 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 OR5AK3PQ8NH89 298 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 ADAMTS15Q8TE58 950 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 JADE3Q92613 823 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 OTUB1Q96FW1 271 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-205ENST00000468338 SFXN2Q96NB2 322 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 CCDC115Q96NT0 180 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 OR7D2Q96RA2 312 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 HOXD1Q9GZZ0 328 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 PTGES2Q9H7Z7 377 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 KCNJ16Q9NPI9 418 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 SDR39U1Q9NRG7 319 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-205ENST00000468338 ARGLU1Q9NWB6 273 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-205ENST00000468338 ZNF629Q9UEG4 869 aaPredicted RBP10.08□□□□□ -0.8
COL4A6-205ENST00000468338 CORINQ9Y5Q5 1042 aa10.08□□□□□ -0.8
COL4A6-205ENST00000468338 RNF103-CHMP3A0A140T963 221 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 C7orf72A4D263 438 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 DUXAA6NLW8 204 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 HMGB1P1B2RPK0 211 aaPredicted RBP10.07□□□□□ -0.8
COL4A6-205ENST00000468338 HCRTR2O43614 444 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 PGRP06401 933 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 EPXP11678 715 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 IDO1P14902 403 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 MATN1P21941 496 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 UQCRC2P22695 453 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 S100A3P33764 101 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 MRPL19P49406 292 aaKnown RBP10.07□□□□□ -0.8
COL4A6-205ENST00000468338 ZNF136P52737 540 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 STX5Q13190 355 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 SLC25A35Q3KQZ1 300 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 SPDYE7PQ495Y7 208 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 PDCD4Q53EL6 469 aaKnown RBP10.07□□□□□ -0.8
COL4A6-205ENST00000468338 DCST2Q5T1A1 773 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 SAXO2Q658L1 398 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 HEPHL1Q6MZM0 1159 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 EPGNQ6UW88 154 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 ANKRD46Q86W74 232 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 CLEC4FQ8N1N0 589 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 TNIP2Q8NFZ5 429 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 OR5D16Q8NGK9 328 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 OR4A15Q8NGL6 344 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 NEURL3Q96EH8 262 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 OR52B2Q96RD2 323 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 SDF2Q99470 211 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 TUBA1CQ9BQE3 449 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 TRIM8Q9BZR9 551 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 SLCO1B3Q9NPD5 702 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 ZIM2Q9NZV7 527 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 CLCF1Q9UBD9 225 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 DKKL1Q9UK85 242 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 PCDHGB4Q9UN71 923 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 CAMK2AQ9UQM7 478 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 CREBBPQ92793 2442 aa10.07□□□□□ -0.8
COL4A6-205ENST00000468338 A0A087WZY1 265 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 OR2M5A3KFT3 312 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 NKX2-6A6NCS4 301 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 SLC22A31A6NKX4 558 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 FAM90A27PA6NNH2 459 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 SCDO00767 359 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 RCBTB2O95199 551 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 TGDSO95455 350 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 IL18BPO95998 194 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 AK1P00568 194 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 PEPDP12955 493 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 HK1P19367 917 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 PSMA4P25789 261 aaKnown RBP10.06□□□□□ -0.8
COL4A6-205ENST00000468338 DGKQP52824 942 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 ATP12AP54707 1039 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 LRRC74AQ0VAA2 488 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 RCAN2Q14206 197 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 CD226Q15762 336 aa10.06□□□□□ -0.8
COL4A6-205ENST00000468338 GSTA3Q16772 222 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms