RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 CPNE3O75131 537 aaKnown RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 RFPL3O75679 317 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 LYPD3O95274 346 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 IFNW1P05000 195 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 ALPPP05187 535 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 THBS1P07996 1170 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 RNF144AP50876 292 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 POU6F2P78424 691 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 MYBPC1Q00872 1141 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 C17orf67Q0P5P2 114 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 COTL1Q14019 142 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 EFR3AQ14156 821 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 EBPQ15125 230 aaKnown RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 NNATQ16517 81 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 EXOC3L2Q2M3D2 409 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 ATAD3BQ5T9A4 648 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 SLC6A19Q695T7 634 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 DESI1Q6ICB0 168 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 COX18Q8N8Q8 333 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 OR52J3Q8NH60 311 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 VANGL1Q8TAA9 524 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 RASSF5Q8WWW0 418 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 EFHD2Q96C19 240 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 RMND5BQ96G75 393 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 ADI1Q9BV57 179 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 TOR3AQ9H497 397 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 NMNAT1Q9HAN9 279 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 PPP1R14DQ9NXH3 145 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 CALML5Q9NZT1 146 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 SAMHD1Q9Y3Z3 626 aaKnown RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 SDK2Q58EX2 2172 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 C9orf172C9J069 976 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF354AO60765 605 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 ALBP02768 609 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 HBQ1P09105 142 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 EPHA2P29317 976 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 GSK3AP49840 483 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 HOXC5Q00444 222 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 PIN1Q13526 163 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 GPR68Q15743 365 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 SIGIRRQ6IA17 410 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 TIPARPQ7Z3E1 657 aaKnown RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 KRT73Q86Y46 540 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 HIPK1Q86Z02 1210 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 OR1N1Q8NGS0 311 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 FKBP10Q96AY3 582 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF524Q96C55 264 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 COQ7Q99807 217 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 NIPSNAP1Q9BPW8 284 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 RTN4RQ9BZR6 473 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 NXF5Q9H1B4 397 aaKnown RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 POLE3Q9NRF9 147 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 C14orf105Q9NVL8 296 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 MRPL39Q9NYK5 338 aaKnown RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 PDP1Q9P0J1 537 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-208ENST00000468300 LOXL2Q9Y4K0 774 aa7.62□□□□□ -1.19
BRCA1-208ENST00000468300 SH3D21A4FU49 640 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CDHR4A6H8M9 788 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 GNGT2O14610 69 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PRG2P13727 222 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 NID1P14543 1247 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ELAVL4P26378 380 aaKnown RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 HTR2AP28223 471 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 HSPA13P48723 471 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CDH12P55289 794 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PDK3Q15120 406 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF141Q15928 474 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 MICAQ29983 383 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 RNF220Q5VTB9 566 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 FNDC7Q5VTL7 733 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 LAIR2Q6ISS4 152 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 RFPL4BQ6ZWI9 263 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 AKAP14Q86UN6 197 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 MORN4Q8NDC4 146 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PIK3C3Q8NEB9 887 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 OR4C3Q8NH37 302 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PROX1Q92786 737 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 DIO2Q92813 273 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ARSGQ96EG1 525 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 LIN37Q96GY3 246 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 RBM4BQ9BQ04 359 aaKnown RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 RBM4Q9BWF3 364 aaKnown RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 WDR54Q9H977 334 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 SLC39A1Q9NY26 324 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CBLCQ9ULV8 474 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PTPRBP23467 1997 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 TNFRSF11BO00300 401 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ADAMDEC1O15204 470 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ALOX12BO75342 701 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 DLGAP3O95886 979 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 AK1P00568 194 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ITGA2P17301 1181 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 DRD5P21918 477 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 MYF6P23409 242 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 PPICP45877 212 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 SPIBQ01892 262 aa7.61□□□□□ -1.19
BRCA1-208ENST00000468300 ZIK1Q3SY52 487 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 CCDC71Q8IV32 467 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-208ENST00000468300 SLC5A8Q8N695 610 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms