RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 ZNF226Q9NYT6 803 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 MKL2Q9ULH7 1088 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 ATXN7L1Q9ULK2 861 aaPredicted RBP9.41□□□□□ -0.9
MSH5-213ENST00000468136 SLC7A7Q9UM01 511 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 SEC16AO15027 2179 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 TRIM64BA6NI03 449 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 H3BSA7 217 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 PEX12O00623 359 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 XPNPEP2O43895 674 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 HCN1O60741 890 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 CNOT3O75175 753 aaKnown RBP9.4□□□□□ -0.9
MSH5-213ENST00000468136 ALOX12BO75342 701 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 CDK4P11802 303 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 BMP7P18075 431 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 PCMT1P22061 227 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 SLC9A3P48764 834 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 RAB15P59190 212 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 MC2RQ01718 297 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 GINS1Q14691 196 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 EBPQ15125 230 aaKnown RBP9.4□□□□□ -0.9
MSH5-213ENST00000468136 ANGPT1Q15389 498 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 NEDD8Q15843 81 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 KLHL22Q53GT1 634 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 ARMC4Q5T2S8 1044 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 PHF19Q5T6S3 580 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 UBE2UQ5VVX9 321 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 ZNF385CQ66K41 422 aaPredicted RBP9.4□□□□□ -0.9
MSH5-213ENST00000468136 COX15Q7KZN9 410 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 OLIG3Q7RTU3 272 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 ANKRD13BQ86YJ7 626 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 CLVS1Q8IUQ0 354 aaPredicted RBP9.4□□□□□ -0.9
MSH5-213ENST00000468136 FAM71CQ8NEG0 241 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 OR2T33Q8NG76 320 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 ISOC1Q96CN7 298 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 ZNF426Q9BUY5 554 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 LAT2Q9GZY6 243 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 FN3KQ9H479 309 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 GPN2Q9H9Y4 310 aaPredicted RBP9.4□□□□□ -0.9
MSH5-213ENST00000468136 MRPS18AQ9NVS2 196 aaKnown RBP9.4□□□□□ -0.9
MSH5-213ENST00000468136 WDR70Q9NW82 654 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 KCNE5Q9UJ90 142 aa9.4□□□□□ -0.9
MSH5-213ENST00000468136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.4□□□□□ -0.9
MSH5-213ENST00000468136 UNC80Q8N2C7 3258 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 PCDH15Q96QU1 1955 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 NUP210LQ5VU65 1888 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 UNC119BA6NIH7 251 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 SAGE2PA6NJ88 616 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 C9J4A7 227 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 FRS3O43559 492 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 IGKV1D-16P01601 117 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 IGHEP01854 428 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 TP53P04637 393 aaPredicted RBP9.39□□□□□ -0.91
MSH5-213ENST00000468136 HTR1AP08908 422 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 UBL4AP11441 157 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 IL12BP29460 328 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 GRK5P34947 590 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ACAA2P42765 397 aaKnown RBP9.39□□□□□ -0.91
MSH5-213ENST00000468136 SLC15A1P46059 708 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 EMP2P54851 167 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 EFNB1P98172 346 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 EMX1Q04741 257 aaPredicted RBP9.39□□□□□ -0.91
MSH5-213ENST00000468136 SNAPC1Q16533 368 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 VWA2Q5GFL6 755 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ALG10BQ5I7T1 473 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 PLA2G2CQ5R387 149 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 LAIR1Q6GTX8 287 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 WBP2NLQ6ICG8 309 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ISLR2Q6UXK2 745 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ZNF620Q6ZNG0 422 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 LINC00299Q6ZSB3 139 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ZNF367Q7RTV3 350 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 PRICKLE2Q7Z3G6 844 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 NKAIN4Q8IVV8 208 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 CCDC103Q8IW40 242 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 NRMQ8IXM6 262 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 GALNT15Q8N3T1 639 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ZNF614Q8N883 585 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ZNF441Q8N8Z8 693 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 B3GNT7Q8NFL0 401 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 TMEM163Q8TC26 289 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 FAR1Q8WVX9 515 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.39□□□□□ -0.91
MSH5-213ENST00000468136 GGHQ92820 318 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 TSLPQ969D9 159 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 VMP1Q96GC9 406 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 PLEKHA8Q96JA3 519 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 LPAR4Q99677 370 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 CDC6Q99741 560 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 CMKLR1Q99788 373 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 CTRCQ99895 268 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 PRSS27Q9BQR3 290 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 GTPBP2Q9BX10 602 aaKnown RBP9.39□□□□□ -0.91
MSH5-213ENST00000468136 STRADBQ9C0K7 418 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 WWTR1Q9GZV5 400 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 ACOT13Q9NPJ3 140 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 TIMMDC1Q9NPL8 285 aa9.39□□□□□ -0.91
MSH5-213ENST00000468136 GPN3Q9UHW5 284 aaPredicted RBP9.39□□□□□ -0.91
MSH5-213ENST00000468136 ZNF223Q9UK11 482 aaPredicted RBP9.39□□□□□ -0.91
MSH5-213ENST00000468136 RP1P56715 2156 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms