RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 C17orf67Q0P5P2 114 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 MGAT2Q10469 447 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 GABRA6Q16445 453 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 C18orf21Q32NC0 220 aaPredicted RBP10.06□□□□□ -0.8
VPS26A-204ENST00000467852 SLC9B1Q4ZJI4 515 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 KLHL22Q53GT1 634 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 CT45A2Q5DJT8 189 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 PRAMEF9Q5VWM5 478 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 ARMC3Q5W041 872 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 FBXW9Q5XUX1 488 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 MRM1Q6IN84 353 aaKnown RBP10.06□□□□□ -0.8
VPS26A-204ENST00000467852 BCL6BQ8N143 479 aaPredicted RBP10.06□□□□□ -0.8
VPS26A-204ENST00000467852 LILRA2Q8N149 483 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 CCDC89Q8N998 374 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 WDR34Q96EX3 536 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 CCDC42Q96M95 316 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 DOK1Q99704 481 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 PSD2Q9BQI7 771 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 SRXN1Q9BYN0 137 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 ZNF665Q9H7R5 613 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 CXorf36Q9H7Y0 433 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 SAYSD1Q9NPB0 183 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 RNF114Q9Y508 228 aa10.06□□□□□ -0.8
VPS26A-204ENST00000467852 TET2Q6N021 2002 aaPredicted RBP10.06□□□□□ -0.8
VPS26A-204ENST00000467852 DNAH1Q9P2D7 4330 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 FAM181BA6NEQ2 426 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 FOXE1O00358 373 aaPredicted RBP10.05□□□□□ -0.8
VPS26A-204ENST00000467852 DHHO43323 396 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 TMPRSS11DO60235 418 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 PIP5K1CO60331 668 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 NDUFA7O95182 113 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 PPP1R3DO95685 299 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 OPN1MWP04001 364 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 OPN1MW2P0DN77 364 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 OPN1MW3P0DN78 364 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 MTNR1AP48039 350 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 MANFP55145 182 aaKnown RBP10.05□□□□□ -0.8
VPS26A-204ENST00000467852 CORO7P57737 925 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 BASP1P80723 227 aaKnown RBP10.05□□□□□ -0.8
VPS26A-204ENST00000467852 IRF8Q02556 426 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 PDCD1Q15116 288 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 TRMT12Q53H54 448 aaKnown RBP10.05□□□□□ -0.8
VPS26A-204ENST00000467852 MED27Q6P2C8 311 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 GALNT5Q7Z7M9 940 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 PRUNE1Q86TP1 453 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 MARCH3Q86UD3 253 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 TRABD2AQ86V40 505 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 RIBC1Q8N443 379 aaPredicted RBP10.05□□□□□ -0.8
VPS26A-204ENST00000467852 WDR31Q8NA23 367 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 POP5Q969H6 163 aaKnown RBP10.05□□□□□ -0.8
VPS26A-204ENST00000467852 RAB39BQ96DA2 213 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 PDLIM5Q96HC4 596 aaKnown RBP10.05□□□□□ -0.8
VPS26A-204ENST00000467852 RNF145Q96MT1 663 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 C20orf96Q9NUD7 363 aaPredicted RBP10.05□□□□□ -0.8
VPS26A-204ENST00000467852 ASB6Q9NWX5 421 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 OR10H1Q9Y4A9 318 aa10.05□□□□□ -0.8
VPS26A-204ENST00000467852 IGLV3-32A0A0A0MS00 114 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 A0A0A6YYD5 115 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 MAGEB16A2A368 324 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 CCDC188H7C350 402 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 BCAS2O75934 225 aaPredicted RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 WNT11O96014 354 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 IGHV3-9P01782 118 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 CRYAAP02489 173 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 GYPCP04921 128 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 ATP1B1P05026 303 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 ADRA2AP08913 450 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 ENPP1P22413 925 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 COL8A2P25067 703 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 NAP1L1P55209 391 aaKnown RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 SARNPP82979 210 aaKnown RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 CSTF3Q12996 717 aaKnown RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 CHIT1Q13231 466 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 DDX39BQ13838 428 aaKnown RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 ELFN2Q5R3F8 820 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 RBM20Q5T481 1227 aaKnown RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 C1QTNF12Q5T7M4 302 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 IKBIPQ70UQ0 350 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 FRA10AC1Q70Z53 315 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 SLC44A2Q8IWA5 706 aaPredicted RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 RDH5Q92781 318 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 RTN4RQ9BZR6 473 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 MS4A7Q9GZW8 240 aaPredicted RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 TPK1Q9H3S4 243 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 DDX31Q9H8H2 851 aaKnown RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 CNOT10Q9H9A5 744 aaKnown RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 FAM120CQ9NX05 1096 aaKnown RBP10.04□□□□□ -0.8
VPS26A-204ENST00000467852 ASH2LQ9UBL3 628 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 OARD1Q9Y530 152 aa10.04□□□□□ -0.8
VPS26A-204ENST00000467852 IGHV3-15A0A0B4J1V0 119 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 C7orf72A4D263 438 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 GJE1A6NN92 205 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 ZNF724A8MTY0 619 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 SMTNL1A8MU46 457 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 ERLIN1O75477 346 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 CLPXO76031 633 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 MPIG6BO95866 241 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 PSMA4P25789 261 aaKnown RBP10.03□□□□□ -0.8
VPS26A-204ENST00000467852 GPC1P35052 558 aa10.03□□□□□ -0.8
VPS26A-204ENST00000467852 RFX3P48380 749 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms