RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SLC16A6O15403 523 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 LRRTM2O43300 516 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 CD160O95971 181 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 PTPRZ1P23471 2315 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-203ENST00000467558 C4orf46Q504U0 113 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 CCDC80Q76M96 950 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 RFT1Q96AA3 541 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 HAVCR1Q96D42 359 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF419Q96HQ0 510 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-203ENST00000467558 RP1L1Q8IWN7 2480 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-203ENST00000467558 ITGA3P26006 1051 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 CRABP1P29762 137 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 SMN1Q16637 294 aaKnown RBP12.88□□□□□ -0.35
BRAT1-203ENST00000467558 ABHD17BQ5VST6 288 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 TMEM215Q68D42 235 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 TMPRSS12Q86WS5 348 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 SLC16A11Q8NCK7 471 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 TMEM41AQ96HV5 264 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 MMACHCQ9Y4U1 282 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 SCRG1O75711 98 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 B3GALT4O96024 378 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 APOC1P02654 83 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 PRPH2P23942 346 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 HTR3AP46098 478 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF91Q05481 1191 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 ILKQ13418 452 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 PRAMEF8Q5VWM4 474 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 PRAMEF7Q5VXH5 474 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 CARD17Q5XLA6 110 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 HMBOX1Q6NT76 420 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 TMPRSS9Q7Z410 1059 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 UBQLNLQ8IYU4 475 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 Q8N402 240 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 KLHL15Q96M94 604 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 DMRTB1Q96MA1 342 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 WDR77Q9BQA1 342 aaPredicted RBP12.88□□□□□ -0.35
BRAT1-203ENST00000467558 FUZQ9BT04 418 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 OR10A5Q9H207 317 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
BRAT1-203ENST00000467558 GJE1A6NN92 205 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 YKT6O15498 198 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF264O43296 627 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 TMPRSS11DO60235 418 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 LIM2P55344 173 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 PER3P56645 1201 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 C1orf94Q6P1W5 598 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 PAQR7Q86WK9 346 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 UEVLDQ8IX04 471 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 GGHQ92820 318 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 PMM1Q92871 262 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 EID2BQ96D98 161 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 DUS3LQ96G46 650 aaKnown RBP12.87□□□□□ -0.35
BRAT1-203ENST00000467558 OR4K3Q96R72 315 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 CST11Q9H112 138 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 GPN2Q9H9Y4 310 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-203ENST00000467558 VDAC3Q9Y277 283 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 CEPT1Q9Y6K0 416 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 RAB3BP20337 219 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 DLX2Q07687 328 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-203ENST00000467558 PRSS36Q5K4E3 855 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 FCRLBQ6BAA4 426 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 Q6ZPB1 254 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-203ENST00000467558 ARMC10Q8N2F6 343 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 SCGB3A2Q96PL1 93 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-203ENST00000467558 KLHL31Q9H511 634 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 C2orf42Q9NWW7 574 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 NEU3Q9UQ49 428 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 SLC17A4Q9Y2C5 497 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 A0A1W2PR48 441 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 H3BML4 177 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-203ENST00000467558 RGS6P49758 472 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 METAP1P53582 386 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 GPLD1P80108 840 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 DMPKQ09013 629 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF750Q32MQ0 723 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 SDR9C7Q8NEX9 313 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 OR2A1Q8NGT9 310 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 RSC1A1Q92681 617 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 TBCCD1Q9NVR7 557 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 DHCR7Q9UBM7 475 aaKnown RBP12.87□□□□□ -0.35
BRAT1-203ENST00000467558 CARD8Q9Y2G2 431 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 A0A1W2PPC4 97 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 A6NIZ1 184 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 CSF2P04141 144 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 CSN2P05814 226 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 CCNOP22674 350 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 TEAD1P28347 426 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 FRKP42685 505 aaPredicted RBP12.87□□□□□ -0.35
BRAT1-203ENST00000467558 HSD17B7P56937 341 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 RAP1BP61224 184 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 RAP1AP62834 184 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 DNAJC22Q8N4W6 341 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 OR6T1Q8NGN1 323 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 MSLNLQ96KJ4 702 aa12.87□□□□□ -0.35
BRAT1-203ENST00000467558 CDC14CA4D256 554 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 WRBO00258 174 aa12.86□□□□□ -0.35
BRAT1-203ENST00000467558 SEC14L5O43304 696 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms