RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GJE1A6NN92 205 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 B9A039 149 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 UBXN8O00124 270 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 COQ9O75208 318 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 WISP3O95389 354 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-203ENST00000467533 ESRRBO95718 433 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 NUDT17P0C025 328 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 CTAGE8P0CG41 777 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 ENPP1P22413 925 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 SERPINF1P36955 418 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 RBMXP38159 391 aaKnown RBP8.93□□□□□ -0.98
HDAC3-203ENST00000467533 IDH3GP51553 393 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-203ENST00000467533 MANFP55145 182 aaKnown RBP8.93□□□□□ -0.98
HDAC3-203ENST00000467533 FOXF1Q12946 379 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 GRAMD1BQ3KR37 738 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 RNASEH2BQ5TBB1 312 aaKnown RBP8.93□□□□□ -0.98
HDAC3-203ENST00000467533 APOOLQ6UXV4 268 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 COMMD6Q7Z4G1 85 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 CTAGE4Q8IX94 777 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 OR51F2Q8NH61 342 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 POC1BQ8TC44 478 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 WDR60Q8WVS4 1066 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 TSPAN17Q96FV3 270 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 SH3YL1Q96HL8 342 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-203ENST00000467533 RHOJQ9H4E5 214 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 ALG9Q9H6U8 611 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 Q9N2J8 555 aa8.93□□□□□ -0.98
HDAC3-203ENST00000467533 CMYA5Q8N3K9 4069 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 UGDHO60701 494 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 ELK4P28324 431 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 ELK3P41970 407 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 IL13RA1P78552 427 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 SLC18A2Q05940 514 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 MGAT5Q09328 741 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 RIN1Q13671 783 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 TSNAXIP1Q2TAA8 658 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 FBXW9Q5XUX1 488 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 GALNT5Q7Z7M9 940 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 C1QL4Q86Z23 238 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 FAM9CQ8IZT9 166 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 ZNF786Q8N393 782 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 METTL4Q8N3J2 472 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 ATP6V1C2Q8NEY4 427 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 OR7G2Q8NG99 324 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 CLDND2Q8NHS1 167 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 STAG3L4Q8TBR4 150 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 ZFP90Q8TF47 636 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 NEU4Q8WWR8 484 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-203ENST00000467533 EXOSC8Q96B26 276 aaKnown RBP8.92□□□□□ -0.98
HDAC3-203ENST00000467533 KCNS3Q9BQ31 491 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 SLITRK2Q9H156 845 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 COQ10BQ9H8M1 238 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 HHATLQ9HCP6 504 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 GIMAP4Q9NUV9 329 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 TAS2R16Q9NYV7 291 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 ING1Q9UK53 422 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-203ENST00000467533 RNF11Q9Y3C5 154 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 WNK1Q9H4A3 2382 aa8.92□□□□□ -0.98
HDAC3-203ENST00000467533 POM121CA8CG34 1229 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 PLOD3O60568 738 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 MTHFD2P13995 350 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 SLC7A1P30825 629 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 ZNHIT3Q15649 155 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-203ENST00000467533 GABRA6Q16445 453 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 TMEM176BQ3YBM2 270 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-203ENST00000467533 TTC19Q6DKK2 380 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-203ENST00000467533 OR7E24Q6IFN5 339 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 VHLLQ6RSH7 139 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 C1orf229Q6ZS94 237 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-203ENST00000467533 C1QL2Q7Z5L3 287 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 RNF214Q8ND24 703 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 ACTRT2Q8TDY3 377 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 TRPC4APQ8TEL6 797 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 UBASH3BQ8TF42 649 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 MAGOHBQ96A72 148 aaKnown RBP8.91□□□□□ -0.98
HDAC3-203ENST00000467533 TM4SF18Q96CE8 201 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 C1QTNF5Q9BXJ0 243 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 TRIM5Q9C035 493 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 NTN4Q9HB63 628 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 CA10Q9NS85 328 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 ASB6Q9NWX5 421 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 GUCA1BQ9UMX6 200 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 SLC12A4Q9UP95 1085 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 MTO1Q9Y2Z2 717 aaKnown RBP8.91□□□□□ -0.98
HDAC3-203ENST00000467533 AMDHD2Q9Y303 409 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 CORINQ9Y5Q5 1042 aa8.91□□□□□ -0.98
HDAC3-203ENST00000467533 TRAV20A0A0B4J274 112 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 A0A1W2PNR3 127 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 ZNF724A8MTY0 619 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 ESPNB1AK53 854 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 LYNX1G3V0Z9 82 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 CYTIPO60759 359 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 PDE5AO76074 875 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 KCNH1O95259 989 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 OXSR1O95747 527 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-203ENST00000467533 TFP02787 698 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 OR4A8P0C604 315 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 LYNX1P0DP58 116 aa8.9□□□□□ -0.98
HDAC3-203ENST00000467533 SAGP10523 405 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-203ENST00000467533 STMN1P16949 149 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms