RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 GALNT8Q9NY28 637 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 PPIEQ9UNP9 301 aaKnown RBP6.85□□□□□ -1.31
SPTA1-204ENST00000467387 AURKCQ9UQB9 309 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 CAMK2AQ9UQM7 478 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 ATG4BQ9Y4P1 393 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 DNAJC15Q9Y5T4 150 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 GPR45Q9Y5Y3 372 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 KCNE2Q9Y6J6 123 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 SPACA6W5XKT8 324 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 ATRQ13535 2644 aa6.85□□□□□ -1.31
SPTA1-204ENST00000467387 FN1P02751 2386 aaKnown RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 COL6A5A8TX70 2615 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 TCRBV5S2A0A599 114 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SH3PXD2BA1X283 911 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 NPEPPSL1A6NEC2 478 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 CCDC154A6NI56 674 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SYT5O00445 386 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 CLOCKO15516 846 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SMPD2O60906 423 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 PFDN1O60925 122 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 TRAPPC6AO75865 159 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 LRATO95237 230 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 ESRRBO95718 433 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 MTHFD2P13995 350 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 JUNBP17275 347 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 ENDOUP21128 410 aaKnown RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SLC6A2P23975 617 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 DCKP27707 260 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 GSK3BP49841 420 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 ID2Q02363 134 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 EMX2Q04743 252 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 TOP3AQ13472 1001 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 RUNX2Q13950 521 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 TOMM20Q15388 145 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SF3B4Q15427 424 aaKnown RBP eCLIP6.84□□□□□ -1.314e-6■■■□□ 18.1
SPTA1-204ENST00000467387 OR4D1Q15615 310 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 CYP51A1Q16850 503 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 PFKFB4Q16877 469 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SMU1Q2TAY7 513 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 ACSF3Q4G176 576 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 RBM48Q5RL73 367 aaKnown RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 CCNYL2Q5T2Q4 361 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SLC22A10Q63ZE4 541 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 RNF165Q6ZSG1 346 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 USP51Q70EK9 711 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 CLVS1Q8IUQ0 354 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 LACC1Q8IV20 430 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 KLHDC8AQ8IYD2 350 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 KRT78Q8N1N4 520 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 CBR4Q8N4T8 237 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 DPP10Q8N608 796 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 NAXEQ8NCW5 288 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 MORN4Q8NDC4 146 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 TMEM52Q8NDY8 209 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 LINC01560Q8TB33 94 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 FNDC8Q8TC99 324 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SLC2A12Q8TD20 617 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 EXT2Q93063 718 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 C3orf30Q96M34 536 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 NSMCE2Q96MF7 247 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 ZNF382Q96SR6 550 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 DOHHQ9BU89 302 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 NPLQ9BXD5 320 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 ALOXE3Q9BYJ1 711 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 SEMA4BQ9NPR2 832 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-204ENST00000467387 TBC1D23Q9NUY8 699 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 NUDT4Q9NZJ9 180 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 ZNF639Q9UID6 485 aa6.84□□□□□ -1.31
SPTA1-204ENST00000467387 HIVEP2P31629 2446 aa6.84□□□□□ -1.32
SPTA1-204ENST00000467387 ANKDD1BA6NHY2 528 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 TRIM64BA6NI03 449 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 H7C1Q1 480 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 DLGAP1O14490 977 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 ACOX3O15254 700 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 SHOXO15266 292 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 ERN1O75460 977 aaKnown RBP6.83□□□□□ -1.32
SPTA1-204ENST00000467387 GMNNO75496 209 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 WDR47O94967 919 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 LY6G6DO95868 133 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 RNASE1P07998 156 aaKnown RBP6.83□□□□□ -1.32
SPTA1-204ENST00000467387 MASP1P48740 699 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 POLR2JP52435 117 aaKnown RBP6.83□□□□□ -1.32
SPTA1-204ENST00000467387 CDH13P55290 713 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 LIM2P55344 173 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 GABARAPL2P60520 117 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 LIPEQ05469 1076 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 FOXO1Q12778 655 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 MAD2L1Q13257 205 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-204ENST00000467387 SERTAD2Q14140 314 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 DAZAP2Q15038 168 aaPredicted RBP6.83□□□□□ -1.32
SPTA1-204ENST00000467387 VPS26BQ4G0F5 336 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 SHEQ5VZ18 495 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 ZNF773Q6PK81 442 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 TMIGD1Q6UXZ0 262 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 GPRIN3Q6ZVF9 776 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 RPS27LQ71UM5 84 aaKnown RBP6.83□□□□□ -1.32
SPTA1-204ENST00000467387 ZNF554Q86TJ5 538 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 ZNF321PQ8N8H1 164 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 SNX31Q8N9S9 440 aa6.83□□□□□ -1.32
SPTA1-204ENST00000467387 OR2L5Q8NG80 312 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms