RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 KIR2DL2P43627 348 aaPredicted RBP19.57■□□□□ 0.72
LIME1-203ENST00000465591 SLC6A8P48029 635 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 SLC18A1P54219 525 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 ATP12AP54707 1039 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 EEFSECP57772 596 aaKnown RBP19.57■□□□□ 0.72
LIME1-203ENST00000465591 UFM1P61960 85 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 SIRPAP78324 504 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 SORDQ00796 357 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 CASP8Q14790 479 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 TESK1Q15569 626 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 BTLAQ7Z6A9 289 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 KIF18BQ86Y91 864 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 WDR75Q8IWA0 830 aaKnown RBP19.57■□□□□ 0.72
LIME1-203ENST00000465591 CNEP1R1Q8N9A8 125 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 ZBTB8AQ96BR9 441 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 SLC35G5Q96KT7 338 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 PIGMQ9H3S5 423 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 TMEM185BQ9H7F4 350 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 RNF122Q9H9V4 155 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 RASSF1Q9NS23 344 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 AIG1Q9NVV5 245 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 THAP1Q9NVV9 213 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 KCNE5Q9UJ90 142 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 ICAM5Q9UMF0 924 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 CARD8Q9Y2G2 431 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 ZNF175Q9Y473 711 aa19.57■□□□□ 0.72
LIME1-203ENST00000465591 PRSS51A0A1B0GVH4 220 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 A6NNC1 897 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 EIF1AYO14602 144 aaKnown RBP19.56■□□□□ 0.72
LIME1-203ENST00000465591 KITP10721 976 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 H2AFXP16104 143 aaPredicted RBP19.56■□□□□ 0.72
LIME1-203ENST00000465591 SHC1P29353 583 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 CPA2P48052 419 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 ZNF41P51814 821 aaPredicted RBP19.56■□□□□ 0.72
LIME1-203ENST00000465591 OCRLQ01968 901 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 GUSBP1Q15486 140 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 TOMM34Q15785 309 aaPredicted RBP19.56■□□□□ 0.72
LIME1-203ENST00000465591 FAM174BQ3ZCQ3 159 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 OR2A2Q6IF42 318 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 BHLHB9Q6PI77 547 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 MAVSQ7Z434 540 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 MTERF4Q7Z6M4 381 aaKnown RBP19.56■□□□□ 0.72
LIME1-203ENST00000465591 CHDHQ8NE62 594 aaPredicted RBP19.56■□□□□ 0.72
LIME1-203ENST00000465591 POLDIP3Q9BY77 421 aaKnown RBP19.56■□□□□ 0.72
LIME1-203ENST00000465591 HOXD1Q9GZZ0 328 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 OR51I1Q9H343 314 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 LIME1Q9H400 295 aa19.56■□□□□ 0.72
LIME1-203ENST00000465591 MED13LQ71F56 2210 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 E9PBE3 544 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 HDAC3O15379 428 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 EFNA2O43921 213 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 FCMRO60667 390 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 CRHP06850 196 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 EIF1AXP47813 144 aaKnown RBP19.55■□□□□ 0.72
LIME1-203ENST00000465591 RPS3AP61247 264 aaKnown RBP19.55■□□□□ 0.72
LIME1-203ENST00000465591 FOXF1Q12946 379 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 DAZAP2Q15038 168 aaPredicted RBP19.55■□□□□ 0.72
LIME1-203ENST00000465591 HDXQ7Z353 690 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 ZNF614Q8N883 585 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 OR10D3Q8NH80 312 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 ARL8AQ96BM9 186 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 ARSGQ96EG1 525 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 OPN3Q9H1Y3 402 aaPredicted RBP19.55■□□□□ 0.72
LIME1-203ENST00000465591 HHATLQ9HCP6 504 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 DTNAQ9Y4J8 743 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 GPR45Q9Y5Y3 372 aa19.55■□□□□ 0.72
LIME1-203ENST00000465591 A0A0J9YW62 118 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 MSTNO14793 375 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 SMNDC1O75940 238 aaKnown RBP eCLIP19.54■□□□□ 0.72
LIME1-203ENST00000465591 SOX30O94993 753 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 CGAP01215 116 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 EPXP11678 715 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 UQCRC2P22695 453 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 DNAJA1P31689 397 aaKnown RBP19.54■□□□□ 0.72
LIME1-203ENST00000465591 CPOXP36551 454 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 CLNS1AP54105 237 aaKnown RBP19.54■□□□□ 0.72
LIME1-203ENST00000465591 RAC1P63000 192 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 FUT5Q11128 374 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 GPR68Q15743 365 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 SGCBQ16585 318 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 PDZK1Q5T2W1 519 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 ANXA8L1Q5VT79 327 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 SAXO2Q658L1 398 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 HEPHL1Q6MZM0 1159 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 TNFAIP8L2Q6P589 184 aaPredicted RBP19.54■□□□□ 0.72
LIME1-203ENST00000465591 ZNF474Q6S9Z5 364 aaPredicted RBP19.54■□□□□ 0.72
LIME1-203ENST00000465591 ZNF527Q8NB42 609 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 MIPOL1Q8TD10 442 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 RAB8BQ92930 207 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 CLEC4MQ9H2X3 399 aaPredicted RBP19.54■□□□□ 0.72
LIME1-203ENST00000465591 MANSC1Q9H8J5 431 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 NKIRAS1Q9NYS0 192 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 PCDHGB4Q9UN71 923 aa19.54■□□□□ 0.72
LIME1-203ENST00000465591 PRRC2AP48634 2157 aaKnown RBP19.53■□□□□ 0.72
LIME1-203ENST00000465591 TNFSF11O14788 317 aa19.53■□□□□ 0.72
LIME1-203ENST00000465591 ADAMDEC1O15204 470 aa19.53■□□□□ 0.72
LIME1-203ENST00000465591 CXCL13O43927 109 aa19.53■□□□□ 0.72
LIME1-203ENST00000465591 OR12D1P0DN82 309 aa19.53■□□□□ 0.72
LIME1-203ENST00000465591 S100A3P33764 101 aa19.53■□□□□ 0.72
LIME1-203ENST00000465591 P2RX1P51575 399 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms