RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 GPR68Q15743 365 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 VMACQ2NL98 169 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 CCNJQ5T5M9 372 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 CMIPQ8IY22 773 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 SLC15A3Q8IY34 581 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 TMEM19Q96HH6 336 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 KCTD14Q9BQ13 255 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-209ENST00000465132 TREX2Q9BQ50 279 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-209ENST00000465132 DOHHQ9BU89 302 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 OSBPL11Q9BXB4 747 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 ANGPTL4Q9BY76 406 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-209ENST00000465132 TMEM181Q9P2C4 612 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 ITGB1BP2Q9UKP3 347 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 DTNAQ9Y4J8 743 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 KCNE3Q9Y6H6 103 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 F8P00451 2351 aa15.92■□□□□ 0.14
CPSF4-209ENST00000465132 ANKRD17O75179 2603 aaKnown RBP15.91■□□□□ 0.14
CPSF4-209ENST00000465132 AKAP9Q99996 3911 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 ACOT7O00154 380 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 T-ENOLP0DO92 83 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 IL7RP16871 459 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 CASP3P42574 277 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 MASP1P48740 699 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 SLC25A3Q00325 362 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 ZNF141Q15928 474 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 SYPL1Q16563 259 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 CALHM3Q86XJ0 350 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 EID3Q8N140 333 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 ACBD4Q8NC06 268 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 RBM15BQ8NDT2 890 aaKnown RBP15.91■□□□□ 0.14
CPSF4-209ENST00000465132 SLC26A7Q8TE54 656 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 C14orf79Q96F83 325 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 CDRT15Q96T59 188 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 BTBD10Q9BSF8 475 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 ENKD1Q9H0I2 346 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 MMADHCQ9H3L0 296 aaPredicted RBP15.91■□□□□ 0.14
CPSF4-209ENST00000465132 IKZF5Q9H5V7 419 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 SH2D2AQ9NP31 389 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.91■□□□□ 0.14
CPSF4-209ENST00000465132 MKLN1Q9UL63 735 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 SLC35A3Q9Y2D2 325 aa15.91■□□□□ 0.14
CPSF4-209ENST00000465132 ALG1L2C9J202 215 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 GTPBP1O00178 669 aaKnown RBP15.9■□□□□ 0.14
CPSF4-209ENST00000465132 NDUFB5O43674 189 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 ZNF354AO60765 605 aaPredicted RBP15.9■□□□□ 0.14
CPSF4-209ENST00000465132 ICOSLGO75144 302 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 PGM3O95394 542 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 THBS1P07996 1170 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 UQCRBP14927 111 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 MSX1P28360 303 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 ADH7P40394 386 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 MEOX1P50221 254 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 LIN52Q52LA3 116 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 EIPR1Q53HC9 387 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 TYW3Q6IPR3 259 aaKnown RBP15.9■□□□□ 0.14
CPSF4-209ENST00000465132 EIF3MQ7L2H7 374 aaKnown RBP15.9■□□□□ 0.14
CPSF4-209ENST00000465132 IFNEQ86WN2 208 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 SULF2Q8IWU5 870 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 MICU2Q8IYU8 434 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 ANKFN1Q8N957 763 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 NFKBIDQ8NI38 313 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 MCUR1Q96AQ8 359 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 TMEM41AQ96HV5 264 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 ZNF597Q96LX8 424 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 ZNF583Q96ND8 569 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 MUC13Q9H3R2 512 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 PTGES2Q9H7Z7 377 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 CMTM6Q9NX76 183 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 KLHL28Q9NXS3 571 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 SLC13A4Q9UKG4 626 aa15.9■□□□□ 0.14
CPSF4-209ENST00000465132 CNOT11Q9UKZ1 510 aaKnown RBP15.9■□□□□ 0.14
CPSF4-209ENST00000465132 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.9■□□□□ 0.14
CPSF4-209ENST00000465132 A0A1B0GTH9 108 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 AGAP5A6NIR3 686 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 NME4O00746 187 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 TFECO14948 347 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-209ENST00000465132 PEX1O43933 1283 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 FADS1O60427 444 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 FCMRO60667 390 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 OXSR1O95747 527 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-209ENST00000465132 IGKV1D-16P01601 117 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 HSD17B1P14061 328 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 PTGS2P35354 604 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 CHRNEQ04844 493 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 BNIP2Q12982 314 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 SELPLGQ14242 412 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 ADRM1Q16186 407 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 GRAMD1BQ3KR37 738 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 FRRS1Q6ZNA5 592 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 MDGA2Q7Z553 956 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 ZZZ3Q8IYH5 903 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 ZNF440Q8IYI8 595 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 ZNF614Q8N883 585 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 FAM57AQ8TBR7 257 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 CA5BP1Q8WTZ4 195 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 WDR60Q8WVS4 1066 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 LZICQ8WZA0 190 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 SDCCAG3Q96C92 435 aa15.89■□□□□ 0.13
CPSF4-209ENST00000465132 RNF145Q96MT1 663 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms