RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 TUBBP07437 444 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 FGF4P08620 206 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 KRT16P08779 473 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 HOXC12P31275 282 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 CCKARP32238 428 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 FRKP42685 505 aaPredicted RBP12.38□□□□□ -0.43
RPP40-203ENST00000464646 LTBQ06643 244 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 FOXF1Q12946 379 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 CTU2Q2VPK5 515 aaKnown RBP12.38□□□□□ -0.43
RPP40-203ENST00000464646 TMEM176BQ3YBM2 270 aaPredicted RBP12.38□□□□□ -0.43
RPP40-203ENST00000464646 DCST2Q5T1A1 773 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 BEND4Q6ZU67 534 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 BIVMQ86UB2 503 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 NUDCD3Q8IVD9 361 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 KRTCAP2Q8N6L1 136 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 FBXO27Q8NI29 283 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 FAM110BQ8TC76 370 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 ACTRT2Q8TDY3 377 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 NUDT8Q8WV74 236 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPP40-203ENST00000464646 ZNF764Q96H86 408 aaPredicted RBP12.38□□□□□ -0.43
RPP40-203ENST00000464646 Q96MF0 132 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 HS3ST6Q96QI5 342 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 STACQ99469 402 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 TACO1Q9BSH4 297 aaKnown RBP12.38□□□□□ -0.43
RPP40-203ENST00000464646 HOXD1Q9GZZ0 328 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 SIRT3Q9NTG7 399 aaPredicted RBP12.38□□□□□ -0.43
RPP40-203ENST00000464646 ZDHHC2Q9UIJ5 367 aa12.38□□□□□ -0.43
RPP40-203ENST00000464646 ITPR3Q14573 2671 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 CELSR1Q9NYQ6 3014 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 A0A1W2PQD3 144 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 GJE1A6NN92 205 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 LYPLA1O75608 230 aaPredicted RBP12.37□□□□□ -0.43
RPP40-203ENST00000464646 NGFRP08138 427 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 PABPC4LP0CB38 370 aaKnown RBP12.37□□□□□ -0.43
RPP40-203ENST00000464646 SLC7A1P30825 629 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 LCN1P31025 176 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 MAP3K8P41279 467 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 EIF1P41567 113 aaKnown RBP12.37□□□□□ -0.43
RPP40-203ENST00000464646 P2RX1P51575 399 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 ZNF117Q03924 483 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 CAPRIN1Q14444 709 aaKnown RBP12.37□□□□□ -0.43
RPP40-203ENST00000464646 GPR68Q15743 365 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 PDCD2Q16342 344 aaPredicted RBP12.37□□□□□ -0.43
RPP40-203ENST00000464646 TMEM44Q2T9K0 475 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 NDUFAF6Q330K2 333 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 BEX5Q5H9J7 111 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 C6orf136Q5SQH8 315 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 YTHDF3Q7Z739 585 aaKnown RBP12.37□□□□□ -0.43
RPP40-203ENST00000464646 OR5D16Q8NGK9 328 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 POC1BQ8TC44 478 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 ZBTB9Q96C00 473 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 C3orf30Q96M34 536 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 DUSP26Q9BV47 211 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 ACTR6Q9GZN1 396 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 CENPHQ9H3R5 247 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 CXorf36Q9H7Y0 433 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 PLSCR4Q9NRQ2 329 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 DUSP22Q9NRW4 184 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 GLRX2Q9NS18 164 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 MKS1Q9NXB0 559 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 PCDHGB4Q9UN71 923 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 KCNE3Q9Y6H6 103 aa12.37□□□□□ -0.43
RPP40-203ENST00000464646 ARID1AO14497 2285 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.36□□□□□ -0.43
RPP40-203ENST00000464646 H7C1Q1 480 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 ZNF195O14628 629 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 SS18L1O75177 396 aaPredicted RBP12.36□□□□□ -0.43
RPP40-203ENST00000464646 NTN1O95631 604 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 CPSF4O95639 269 aaKnown RBP12.36□□□□□ -0.43
RPP40-203ENST00000464646 PPP3CBP16298 524 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 IL11P20809 199 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 MATN1P21941 496 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 IL32P24001 234 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 CASP9P55211 416 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 VSNL1P62760 191 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 OCRLQ01968 901 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 MAD2L1Q13257 205 aaPredicted RBP12.36□□□□□ -0.43
RPP40-203ENST00000464646 MLC1Q15049 377 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 UGT3A2Q3SY77 523 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 BHLHB9Q6PI77 547 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 C20orf204Q6ZNR8 217 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 RNF165Q6ZSG1 346 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 PLEKHM3Q6ZWE6 761 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 MTERF4Q7Z6M4 381 aaKnown RBP12.36□□□□□ -0.43
RPP40-203ENST00000464646 CXorf67Q86X51 503 aaPredicted RBP12.36□□□□□ -0.43
RPP40-203ENST00000464646 ZNF619Q8N2I2 560 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 NATD1Q8N6N6 113 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 TMEM171Q8WVE6 324 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 HOXB13Q92826 284 aaPredicted RBP12.36□□□□□ -0.43
RPP40-203ENST00000464646 ARL8AQ96BM9 186 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 MOAP1Q96BY2 351 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 PLPPR2Q96GM1 343 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 PKNOX2Q96KN3 472 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 SLC35G5Q96KT7 338 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 OR7D2Q96RA2 312 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 KLHDC3Q9BQ90 382 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 ROPN1BQ9BZX4 212 aaPredicted RBP12.36□□□□□ -0.43
RPP40-203ENST00000464646 ANKZF1Q9H8Y5 726 aa12.36□□□□□ -0.43
RPP40-203ENST00000464646 ROPN1Q9HAT0 212 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms