RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 GANCQ8TET4 914 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SORCS1Q8WY21 1168 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ST8SIA4Q92187 359 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 DACT3Q96B18 629 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 SLC41A3Q96GZ6 507 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 LRIG1Q96JA1 1093 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 PGLYRP3Q96LB9 341 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SAMD8Q96LT4 415 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 DPH7Q9BTV6 452 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 IFT27Q9BW83 186 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 C1QTNF2Q9BXJ5 285 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 OR2AG1Q9H205 316 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 OR52A5Q9H2C5 316 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 UBQLN3Q9H347 655 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 NPDC1Q9NQX5 325 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 HCN3Q9P1Z3 774 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 IL36AQ9UHA7 158 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 TAC3Q9UHF0 121 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 ING1Q9UK53 422 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 FBXL3Q9UKT7 428 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 SCML1Q9UN30 329 aa6.8□□□□□ -1.32
USP48-206ENST00000464577 GPR55Q9Y2T6 319 aaPredicted RBP6.8□□□□□ -1.32
USP48-206ENST00000464577 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.79□□□□□ -1.32
USP48-206ENST00000464577 PLSCR5A0PG75 271 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 GSAPA4D1B5 854 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 UNC119BA6NIH7 251 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 A8MUA0 341 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 MAN2B1O00754 1011 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 TSPAN4O14817 238 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 PIP5K1CO60331 668 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 CLEC3AO75596 197 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 NTN1O95631 604 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 WDPCPO95876 746 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 ECDO95905 644 aaPredicted RBP6.79□□□□□ -1.32
USP48-206ENST00000464577 HPXP02790 462 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 MT-ND4P03905 459 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 CTSLP07711 333 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 ANKRD34CP0C6C1 535 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 CPN1P15169 458 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 CALCRP30988 508 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 GDNFP39905 211 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 FLT3LGP49771 235 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 CCR9P51686 369 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 RGS8P57771 180 aaPredicted RBP6.79□□□□□ -1.32
USP48-206ENST00000464577 E2F1Q01094 437 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 ZNF273Q14593 569 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 FAM27D1Q5T7N8 215 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 PRPF38BQ5VTL8 546 aaKnown RBP6.79□□□□□ -1.32
USP48-206ENST00000464577 FAM46CQ5VWP2 391 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 B3GNTL1Q67FW5 361 aaPredicted RBP6.79□□□□□ -1.32
USP48-206ENST00000464577 OR4C11Q6IEV9 310 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 RGS7BPQ6MZT1 257 aaPredicted RBP6.79□□□□□ -1.32
USP48-206ENST00000464577 RPL13AP3Q6NVV1 102 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 GAREM2Q75VX8 874 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 VRK2Q86Y07 508 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 OR6V1Q8N148 313 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 EID2Q8N6I1 236 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 ZNF527Q8NB42 609 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 BEST4Q8NFU0 473 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 OR6M1Q8NGM8 313 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 SLC2A12Q8TD20 617 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 PCNPQ8WW12 178 aaKnown RBP6.79□□□□□ -1.32
USP48-206ENST00000464577 ART5Q96L15 291 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 LINC00052Q96N35 136 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 OR7D2Q96RA2 312 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 BBS4Q96RK4 519 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 DDOQ99489 341 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 MCHR1Q99705 422 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 WDR26Q9H7D7 661 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 POLMQ9NP87 494 aaPredicted RBP6.79□□□□□ -1.32
USP48-206ENST00000464577 ACSL5Q9ULC5 683 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 ZMIZ1Q9ULJ6 1067 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 SPATA2Q9UM82 520 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 GPR34Q9UPC5 381 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 ASF1AQ9Y294 204 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 RWDD3Q9Y3V2 267 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 NINQ8N4C6 2090 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 PCNTO95613 3336 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 CKAP5Q14008 2032 aa6.79□□□□□ -1.32
USP48-206ENST00000464577 FAM183AA6NL82 134 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 A8MXK9 166 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 E9PI62 339 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 BHLHE40O14503 412 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 EMC8O43402 210 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 FRS3O43559 492 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 NDUFA2O43678 99 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 TMEM127O75204 238 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 MTRF1O75570 445 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 POP7O75817 140 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 PAPLNO95428 1278 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 TFP02787 698 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 THY1P04216 161 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ZGLP1P0C6A0 271 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 EPXP11678 715 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 SNRPBP14678 240 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 GJA1P17302 382 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 ATF1P18846 271 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 PSMB1P20618 241 aaKnown RBP6.78□□□□□ -1.32
USP48-206ENST00000464577 TBXA2RP21731 343 aa6.78□□□□□ -1.32
USP48-206ENST00000464577 AHRP35869 848 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms