RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KLHDC3Q9BQ90 382 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 UTP23Q9BRU9 249 aaKnown RBP13.11□□□□□ -0.31
COL6A1-202ENST00000463060 CHID1Q9BWS9 393 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 LAT2Q9GZY6 243 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 GALNT9Q9HCQ5 603 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 NDUFAF4Q9P032 175 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 ICAM5Q9UMF0 924 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 AP4S1Q9Y587 144 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 HRH3Q9Y5N1 445 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 CNTRLQ7Z7A1 2325 aa13.11□□□□□ -0.31
COL6A1-202ENST00000463060 LAMA5O15230 3695 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 PCNX3Q9H6A9 2034 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 H3BNH8 94 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 M0R3H8 397 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 FFAR1O14842 300 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF264O43296 627 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 FRS3O43559 492 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 SCO2O43819 266 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 KRT36O76013 467 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 PRSS23O95084 383 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 UBL4AP11441 157 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 CLK3P49761 638 aaKnown RBP13.1□□□□□ -0.31
COL6A1-202ENST00000463060 RPP38P78345 283 aaKnown RBP13.1□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF117Q03924 483 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 C17orf67Q0P5P2 114 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 NDUFAF6Q330K2 333 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 SPINK14Q6IE38 97 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 ZDHHC21Q8IVQ6 265 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 MISPQ8IVT2 679 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF614Q8N883 585 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 GATSQ8NAP1 163 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 PSD4Q8NDX1 1056 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 PHOSPHO1Q8TCT1 267 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF524Q96C55 264 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 ARMC7Q9H6L4 198 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 CACYBPQ9HB71 228 aaKnown RBP13.1□□□□□ -0.31
COL6A1-202ENST00000463060 DEPPQ9NTK1 212 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 KLHL28Q9NXS3 571 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 ACAD8Q9UKU7 415 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 AURKCQ9UQB9 309 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 CARD8Q9Y2G2 431 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 ENPP4Q9Y6X5 453 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 HEATR5AQ86XA9 2040 aa13.1□□□□□ -0.31
COL6A1-202ENST00000463060 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 FAAHO00519 579 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 DPM1O60762 260 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 FMO6PO60774 539 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 TRIM3O75382 744 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-202ENST00000463060 SNX4O95219 450 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 F10P00742 488 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 MT-ND1P03886 318 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 GKN3PP0CG01 181 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 CNR1P21554 472 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 CASRP41180 1078 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 TNFSF10P50591 281 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 OC90Q02509 493 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-202ENST00000463060 EPS8Q12929 822 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 OR1C1Q15619 314 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 INPP5JQ15735 1006 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-202ENST00000463060 TBCELQ5QJ74 424 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF440Q8IYI8 595 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 LILRA2Q8N149 483 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 FADS6Q8N9I5 356 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 WDSUB1Q8N9V3 476 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 TOR1AIP2Q8NFQ8 470 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 ARSGQ96EG1 525 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 ZNF300Q96RE9 604 aaPredicted RBP13.09□□□□□ -0.31
COL6A1-202ENST00000463060 PRR14Q9BWN1 585 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 OSBPL11Q9BXB4 747 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 METTL7AQ9H8H3 244 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 SACM1LQ9NTJ5 587 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 SLC9A8Q9Y2E8 581 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 PCDHGB7Q9Y5F8 929 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 PCDHGB6Q9Y5F9 930 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 WIF1Q9Y5W5 379 aa13.09□□□□□ -0.31
COL6A1-202ENST00000463060 H0YHG0 523 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 GTPBP1O00178 669 aaKnown RBP13.08□□□□□ -0.32
COL6A1-202ENST00000463060 HNRNPRO43390 633 aaKnown RBP13.08□□□□□ -0.32
COL6A1-202ENST00000463060 TIPRLO75663 272 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 IFNW1P05000 195 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 ITGB2P05107 769 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 FABP3P05413 133 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 SP1P08047 785 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 UBTFL6P0CB48 400 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-202ENST00000463060 FUT4P22083 530 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 HTR2AP28223 471 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 MSX1P28360 303 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 P2RX1P51575 399 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 RGS8P57771 180 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-202ENST00000463060 HOXC5Q00444 222 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 FOXO1Q12778 655 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 ST3GAL2Q16842 350 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 PRAMEF20Q5VT98 475 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 ZNF550Q7Z398 422 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 ZNF605Q86T29 641 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 LSMEM1Q8N8F7 131 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 CATSPER1Q8NEC5 780 aa13.08□□□□□ -0.32
COL6A1-202ENST00000463060 VANGL1Q8TAA9 524 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms