RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 ZNF117Q03924 483 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 VEZF1Q14119 521 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTPN7-204ENST00000462815 PPP4R4Q6NUP7 873 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 CBLN3Q6UW01 205 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 ZYG11AQ6WRX3 759 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 Q6ZSR9 355 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 DTX2Q86UW9 622 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 HIPK1Q86Z02 1210 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 TUSC5Q8IXB3 177 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 LILRA2Q8N149 483 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 NUP43Q8NFH3 380 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 STEAP2Q8NFT2 490 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 KBTBD8Q8NFY9 601 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 OR2T11Q8NH01 316 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 FBXO30Q8TB52 745 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 ACMSDQ8TDX5 336 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 SMAP2Q8WU79 429 aaPredicted RBP9.91□□□□□ -0.82
PTPN7-204ENST00000462815 FBXW5Q969U6 566 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 C16orf58Q96GQ5 468 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 SH3YL1Q96HL8 342 aaPredicted RBP9.91□□□□□ -0.82
PTPN7-204ENST00000462815 METTL2AQ96IZ6 378 aaKnown RBP9.91□□□□□ -0.82
PTPN7-204ENST00000462815 MS4A4EQ96PG1 132 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 TRAF4Q9BUZ4 470 aaPredicted RBP9.91□□□□□ -0.82
PTPN7-204ENST00000462815 TXLNGYQ9BZA5 131 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 TUBB1Q9H4B7 451 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 SIRT3Q9NTG7 399 aaPredicted RBP9.91□□□□□ -0.82
PTPN7-204ENST00000462815 ICAM5Q9UMF0 924 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 ABCA1O95477 2261 aa9.91□□□□□ -0.82
PTPN7-204ENST00000462815 NBEAL1Q6ZS30 2694 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 FREM1Q5H8C1 2179 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 RNF212BA8MTL3 300 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 SHISA9B4DS77 424 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 NPIPB9F8W1W9 429 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 ETV2O00321 342 aaPredicted RBP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 RIPK2O43353 540 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 SYNGR4O95473 234 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 PROCP04070 461 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 FAM153BP0C7A2 387 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 PYGBP11216 843 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 BSPH1Q075Z2 132 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 TOMM34Q15785 309 aaPredicted RBP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 FAM153CQ494X1 144 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 CCNJQ5T5M9 372 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 RNF165Q6ZSG1 346 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 TDRPQ86YL5 185 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 MISPQ8IVT2 679 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 GSPT2Q8IYD1 628 aaKnown RBP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 OR6Y1Q8NGX8 325 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 B4GALNT2Q8NHY0 566 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 PIWIL2Q8TC59 973 aaKnown RBP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 AENQ8WTP8 325 aaKnown RBP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 OTUB1Q96FW1 271 aaPredicted RBP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 CCT7Q99832 543 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 PSD2Q9BQI7 771 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 HDHD5Q9BXW7 423 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 GRIP2Q9C0E4 1043 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 CXorf36Q9H7Y0 433 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 BCO1Q9HAY6 547 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 LRTM1Q9HBL6 345 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 GP6Q9HCN6 339 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 UBQLN4Q9NRR5 601 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 ACSS1Q9NUB1 689 aaPredicted RBP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 STOML1Q9UBI4 398 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 GDF2Q9UK05 429 aaPredicted RBP9.9□□□□□ -0.82
PTPN7-204ENST00000462815 LIPT1Q9Y234 373 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 ACTL7BQ9Y614 415 aa9.9□□□□□ -0.82
PTPN7-204ENST00000462815 A0A1W2PPM1 405 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 TLX2O43763 284 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-204ENST00000462815 RAMP1O60894 148 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 ADAM11O75078 769 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 ADAP00813 363 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 CD3EP07766 207 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 SFTPDP35247 375 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 IDUAP35475 653 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 ZNF41P51814 821 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-204ENST00000462815 CARD18P57730 90 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 DNAJB13P59910 316 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 RNPS1Q15287 305 aaKnown RBP9.89□□□□□ -0.83
PTPN7-204ENST00000462815 IMPG1Q17R60 797 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 VPS26BQ4G0F5 336 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 KLHL26Q53HC5 615 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 CLEC6AQ6EIG7 209 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 C11orf71Q6IPW1 123 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 HMBOX1Q6NT76 420 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 ZCCHC12Q6PEW1 402 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 STK32CQ86UX6 486 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 ZNF619Q8N2I2 560 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 CCNYL1Q8N7R7 359 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 BANPQ8N9N5 519 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 CEP70Q8NHQ1 597 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 HSD17B8Q92506 261 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 ZNF75CPQ92670 426 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-204ENST00000462815 CPNE4Q96A23 557 aaPredicted RBP9.89□□□□□ -0.83
PTPN7-204ENST00000462815 FAM120BQ96EK7 910 aaKnown RBP9.89□□□□□ -0.83
PTPN7-204ENST00000462815 TACO1Q9BSH4 297 aaKnown RBP9.89□□□□□ -0.83
PTPN7-204ENST00000462815 POTEKPQ9BYX7 375 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 REEP4Q9H6H4 257 aa9.89□□□□□ -0.83
PTPN7-204ENST00000462815 HHATLQ9HCP6 504 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms