RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CEBPDP49716 269 aaPredicted RBP2.34□□□□□ -2.03
HDAC6-212ENST00000461608 NOVA1P51513 510 aaKnown RBP2.34□□□□□ -2.03
HDAC6-212ENST00000461608 ACTR1AP61163 376 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 VLDLRP98155 873 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 NCBP1Q09161 790 aaKnown RBP2.34□□□□□ -2.03
HDAC6-212ENST00000461608 CHIT1Q13231 466 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 SERTAD2Q14140 314 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 KCNJ11Q14654 390 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 TGIF1Q15583 401 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 SYPL1Q16563 259 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 SLC5A12Q1EHB4 618 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 TIMM50Q3ZCQ8 353 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 GLYR1Q49A26 553 aaPredicted RBP2.34□□□□□ -2.03
HDAC6-212ENST00000461608 CCDC152Q4G0S7 254 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 BEND3Q5T5X7 828 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 CENPPQ6IPU0 288 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 PYHIN1Q6K0P9 492 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 PRSS48Q7RTY5 328 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 CSNK1A1LQ8N752 337 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 TRPV1Q8NER1 839 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 OR9A4Q8NGU2 314 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 ZNF606Q8WXB4 792 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 CCT8L2Q96SF2 557 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 CITED1Q99966 193 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 PAXXQ9BUH6 204 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 C19orf24Q9BVV8 132 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 TM2D1Q9BX74 207 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 SMYD3Q9H7B4 428 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 LRRC40Q9H9A6 602 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 ELOVL3Q9HB03 270 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 APMAPQ9HDC9 416 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 PALMDQ9NP74 551 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 UTP6Q9NYH9 597 aaKnown RBP2.34□□□□□ -2.03
HDAC6-212ENST00000461608 DHRS4-AS1Q9P1J3 65 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 SPRR3Q9UBC9 169 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 PCSK1NQ9UHG2 260 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 RSPH14Q9UHP6 348 aa2.34□□□□□ -2.03
HDAC6-212ENST00000461608 FRMPD4Q14CM0 1322 aa2.34□□□□□ -2.04
HDAC6-212ENST00000461608 PTCH1Q13635 1447 aa2.34□□□□□ -2.04
HDAC6-212ENST00000461608 ATP10DQ9P241 1426 aa2.34□□□□□ -2.04
HDAC6-212ENST00000461608 ATAD2BQ9ULI0 1458 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 A0A087WWV3 80 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 SMIM28A0A1B0GU29 152 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 DHRS7CA6NNS2 312 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 PP2D1A8MPX8 630 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 E9PLD3 99 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 F5H6K3 240 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 MPHOSPH10O00566 681 aaKnown RBP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 CXCL11O14625 94 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 TAPBPO15533 448 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 MTX2O75431 263 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 NEBLO76041 1014 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 TM7SF2O76062 418 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 B3GAT3O94766 335 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 DUSP14O95147 198 aaKnown RBP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 VENTXO95231 258 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 LRATO95237 230 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 PGK1P00558 417 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 IGHG3P01860 377 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 CAPN2P17655 700 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 BCL3P20749 454 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 HPCAL1P37235 193 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 HNRNPA3P51991 378 aaKnown RBP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 PLK1P53350 603 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 ARFIP1P53367 373 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 EWSR1Q01844 656 aaKnown RBP eCLIP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 MAP2K1Q02750 393 aaPredicted RBP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 PAX2Q02962 417 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 KLRC3Q07444 240 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 DPYSL3Q14195 570 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 LAGE3Q14657 143 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 SLC1A5Q15758 541 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 FILIP1LQ4L180 1135 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 EIPR1Q53HC9 387 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 TCTEX1D4Q5JR98 221 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 PAGE2BQ5JRK9 111 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 ATAD3CQ5T2N8 411 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 LIPNQ5VXI9 398 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 UFSP1Q6NVU6 142 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 P2RY8Q86VZ1 359 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 GPD1LQ8N335 351 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 FAM133AQ8N9E0 248 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 RHOXF1Q8NHV9 184 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 CNIH3Q8TBE1 160 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 ADAMTS16Q8TE57 1224 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 TRUB1Q8WWH5 349 aaKnown RBP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 C18orf25Q96B23 403 aaPredicted RBP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 FGGYQ96C11 551 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 SLC41A3Q96GZ6 507 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 COQ2Q96H96 371 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 C12orf66Q96MD2 445 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 TGM7Q96PF1 710 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 KIR2DL4Q99706 377 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 SLC6A7Q99884 636 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 PYGO2Q9BRQ0 406 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 SLC35A5Q9BS91 424 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 NIPSNAP3BQ9BS92 247 aa2.33□□□□□ -2.04
HDAC6-212ENST00000461608 WRAP73Q9P2S5 460 aaPredicted RBP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 XPO7Q9UIA9 1087 aaKnown RBP2.33□□□□□ -2.04
HDAC6-212ENST00000461608 L3MBTL1Q9Y468 752 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms