RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 NUDT9Q9BW91 350 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 NXF5Q9H1B4 397 aaKnown RBP6.88□□□□□ -1.31
LSG1-205ENST00000461343 ANKRA2Q9H9E1 313 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 SMURF2Q9HAU4 748 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 APMAPQ9HDC9 416 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 MED17Q9NVC6 651 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 CLN6Q9NWW5 311 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 DNAJB12Q9NXW2 375 aaKnown RBP6.88□□□□□ -1.31
LSG1-205ENST00000461343 MYOTQ9UBF9 498 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 TCFL5Q9UL49 500 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 NDRG4Q9ULP0 352 aaKnown RBP6.88□□□□□ -1.31
LSG1-205ENST00000461343 FARSAQ9Y285 508 aaKnown RBP6.88□□□□□ -1.31
LSG1-205ENST00000461343 YARS2Q9Y2Z4 477 aaKnown RBP6.88□□□□□ -1.31
LSG1-205ENST00000461343 PCDHGA6Q9Y5G7 932 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 SNX5Q9Y5X3 404 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 NPFFR2Q9Y5X5 522 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 B3GALT1Q9Y5Z6 326 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 SPIN1Q9Y657 262 aaPredicted RBP6.88□□□□□ -1.31
LSG1-205ENST00000461343 KCNE3Q9Y6H6 103 aa6.88□□□□□ -1.31
LSG1-205ENST00000461343 IGHV1-45A0A0A0MS14 117 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 SMIM31A0A1B0GVY4 71 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 CPSF4LA6NMK7 179 aaKnown RBP6.87□□□□□ -1.31
LSG1-205ENST00000461343 A8MUA0 341 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 H3BN98 237 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 HCN1O60741 890 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 DKK1O94907 266 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 OR6B1O95007 311 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 DIRAS1O95057 198 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 C1QCP02747 245 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 TCN2P20062 427 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 EEF1B2P24534 225 aaKnown RBP6.87□□□□□ -1.31
LSG1-205ENST00000461343 EVI2BP34910 448 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 PTGER1P34995 402 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 SOX18P35713 384 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 GGT2P36268 569 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 CASRP41180 1078 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 SLC1A3P43003 542 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 RPL5P46777 297 aaKnown RBP6.87□□□□□ -1.31
LSG1-205ENST00000461343 IST1P53990 364 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 CRISP1P54107 249 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 RRADP55042 308 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 CTBP2P56545 445 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 SNRPNP63162 240 aaKnown RBP6.87□□□□□ -1.31
LSG1-205ENST00000461343 IL5RAQ01344 420 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 MVKQ03426 396 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 OR1Q1Q15612 314 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.87□□□□□ -1.31
LSG1-205ENST00000461343 BTBD16Q32M84 506 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 ALG10BQ5I7T1 473 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 PRAMEF17Q5VTA0 474 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 BROXQ5VW32 411 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 ZNF770Q6IQ21 691 aaPredicted RBP6.87□□□□□ -1.31
LSG1-205ENST00000461343 SLC27A4Q6P1M0 643 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 TMEM154Q6P9G4 183 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 PODNL1Q6PEZ8 512 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 DGAT2L6Q6ZPD8 337 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 RASSF6Q6ZTQ3 369 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 GDF7Q7Z4P5 450 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 C9orf40Q8IXQ3 194 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 CLIP4Q8N3C7 705 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 TMCO5AQ8N6Q1 288 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 ZSCAN1Q8NBB4 408 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 APCDD1LQ8NCL9 501 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 FAM71CQ8NEG0 241 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 NFAM1Q8NET5 270 aaPredicted RBP6.87□□□□□ -1.31
LSG1-205ENST00000461343 TSPAN14Q8NG11 270 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 OR8J1Q8NGP2 316 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 OR5W2Q8NH69 310 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 PHOSPHO1Q8TCT1 267 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 ELP5Q8TE02 316 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 TMEM239Q8WW34 195 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 ST8SIA1Q92185 356 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 FCGR1BQ92637 280 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 RFKQ969G6 155 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 MYDGFQ969H8 173 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 PLEKHA8Q96JA3 519 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 ADOQ96SZ5 270 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 TMEM43Q9BTV4 400 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 PTGES2Q9H7Z7 377 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 CNIH4Q9P003 139 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 TMEFF2Q9UIK5 374 aaPredicted RBP6.87□□□□□ -1.31
LSG1-205ENST00000461343 SLC7A7Q9UM01 511 aa6.87□□□□□ -1.31
LSG1-205ENST00000461343 KNTC1P50748 2209 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 NINQ8N4C6 2090 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 A0A087WZY1 265 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 A0A0B4J2E0 115 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 TRBV4-1A0A0J9YWV2 114 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 A0A1B0GX12 115 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 EFCAB10A6NFE3 127 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 ELOA3DA6NLF2 546 aaPredicted RBP6.86□□□□□ -1.31
LSG1-205ENST00000461343 DLGAP1O14490 977 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 FFAR1O14842 300 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 HCRTR2O43614 444 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 IDH3BO43837 385 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 OR2T1O43869 369 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 TSPAN2O60636 221 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 NOL3O60936 208 aaKnown RBP6.86□□□□□ -1.31
LSG1-205ENST00000461343 BCAS1O75363 584 aaPredicted RBP6.86□□□□□ -1.31
LSG1-205ENST00000461343 SLC25A12O75746 678 aa6.86□□□□□ -1.31
LSG1-205ENST00000461343 SEC24DO94855 1032 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms