RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ANXA11P50995 505 aaKnown RBP13.89□□□□□ -0.19
VARS-219ENST00000461328 CCR4P51679 360 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 EEFSECP57772 596 aaKnown RBP13.89□□□□□ -0.19
VARS-219ENST00000461328 BCL2A1Q16548 175 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 GLYR1Q49A26 553 aaPredicted RBP13.89□□□□□ -0.19
VARS-219ENST00000461328 TIGD2Q4W5G0 525 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 SAXO2Q658L1 398 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 PPP4R4Q6NUP7 873 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 POMZP3Q6PJE2 187 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 EPGNQ6UW88 154 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 MTERF4Q7Z6M4 381 aaKnown RBP13.89□□□□□ -0.19
VARS-219ENST00000461328 CHDHQ8NE62 594 aaPredicted RBP13.89□□□□□ -0.19
VARS-219ENST00000461328 RFWD2Q8NHY2 731 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 MIPOL1Q8TD10 442 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 RAB8BQ92930 207 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 WNT2BQ93097 391 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 ZFP3Q96NJ6 502 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 SDF2Q99470 211 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 INPP5KQ9BT40 448 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 RMND5AQ9H871 391 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 MED17Q9NVC6 651 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 STOML1Q9UBI4 398 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 ITGB1BP2Q9UKP3 347 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 ZNF337Q9Y3M9 751 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 DTNAQ9Y4J8 743 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 PDZD2O15018 2839 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 KIAA1549Q9HCM3 1950 aa13.89□□□□□ -0.19
VARS-219ENST00000461328 TACC2O95359 2948 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 MED12Q93074 2177 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 CYP7B1O75881 506 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 TGDSO95455 350 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 IL18BPO95998 194 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 GSNP06396 782 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 UBL4AP11441 157 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 CDKN2CP42773 168 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 POLR2JP52435 117 aaKnown RBP13.88□□□□□ -0.19
VARS-219ENST00000461328 AQP5P55064 265 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 RPS3AP61247 264 aaKnown RBP13.88□□□□□ -0.19
VARS-219ENST00000461328 ZNF117Q03924 483 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 ARHGAP11BQ3KRB8 267 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 FBXL19-AS1Q494R0 122 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 GPAT3Q53EU6 434 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 KLHL26Q53HC5 615 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.88□□□□□ -0.19
VARS-219ENST00000461328 PDZK1Q5T2W1 519 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 PLXDC2Q6UX71 529 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 OLIG3Q7RTU3 272 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 CDH24Q86UP0 819 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 RNF130Q86XS8 419 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 ZZZ3Q8IYH5 903 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 GCNT2Q8N0V5 402 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 OR9I1Q8NGQ6 314 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 PNPT1Q8TCS8 783 aaKnown RBP13.88□□□□□ -0.19
VARS-219ENST00000461328 ZBTB8AQ96BR9 441 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 MAGEB18Q96M61 343 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 UCN2Q96RP3 112 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 PINK1Q9BXM7 581 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 NMUR2Q9GZQ4 415 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 SDR39U1Q9NRG7 319 aaPredicted RBP13.88□□□□□ -0.19
VARS-219ENST00000461328 CLCF1Q9UBD9 225 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 FOXD3Q9UJU5 478 aaPredicted RBP13.88□□□□□ -0.19
VARS-219ENST00000461328 MKLN1Q9UL63 735 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 CARD8Q9Y2G2 431 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 WDR45Q9Y484 360 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 AP4B1Q9Y6B7 739 aa13.88□□□□□ -0.19
VARS-219ENST00000461328 SLC22A20A6NK97 555 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 RCBTB2O95199 551 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 ME2P23368 584 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 IDH3AP50213 366 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 SUMO3P55854 103 aaPredicted RBP13.87□□□□□ -0.19
VARS-219ENST00000461328 FOXF2Q12947 444 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 PLPPR5Q32ZL2 321 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 NDUFAF6Q330K2 333 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 C6orf10Q5SRN2 563 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 ADGRE4PQ86SQ3 457 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 CKAP2Q8WWK9 683 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 ROPN1LQ96C74 230 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 INTS12Q96CB8 462 aaKnown RBP13.87□□□□□ -0.19
VARS-219ENST00000461328 ITCHQ96J02 903 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 RNF145Q96MT1 663 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 EBF4Q9BQW3 602 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 SFXN3Q9BWM7 321 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 ZNF350Q9GZX5 532 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 CRIM1Q9NZV1 1036 aa13.87□□□□□ -0.19
VARS-219ENST00000461328 FAM234BA2RU67 622 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 SERINC4A6NH21 518 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 NPIPB9F8W1W9 429 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 H0YC42 278 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 EIF1AYO14602 144 aaKnown RBP13.86□□□□□ -0.19
VARS-219ENST00000461328 OIP5O43482 229 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 KIAA0513O60268 411 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 KRT75O95678 551 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 TGM6O95932 706 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 EIF1AXP47813 144 aaKnown RBP13.86□□□□□ -0.19
VARS-219ENST00000461328 P2RX1P51575 399 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 TPD52P55327 224 aaPredicted RBP13.86□□□□□ -0.19
VARS-219ENST00000461328 CLDN20P56880 219 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 FOXF1Q12946 379 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 SGCBQ16585 318 aa13.86□□□□□ -0.19
VARS-219ENST00000461328 HEPHL1Q6MZM0 1159 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms